RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
ERCC1-203ENST00000340192 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
ERCC1-203ENST00000340192 HERC1Q15751 4861 aa9.26□□□□□ -0.93
ERCC1-203ENST00000340192 IGHV3OR16-9A0A0B4J2B5 98 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 APOMO95445 188 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 ORMDL2Q53FV1 153 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 C2orf66Q6UXQ4 117 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
ERCC1-203ENST00000340192 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
ERCC1-203ENST00000340192 PKHD1L1Q86WI1 4243 aa9.25□□□□□ -0.93
ERCC1-203ENST00000340192 K7EMI3 77 aa9.24□□□□□ -0.93
ERCC1-203ENST00000340192 Q6ZRU5 148 aa9.24□□□□□ -0.93
ERCC1-203ENST00000340192 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
ERCC1-203ENST00000340192 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
ERCC1-203ENST00000340192 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 RHEBQ15382 184 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 STPG4Q8N801 248 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
ERCC1-203ENST00000340192 TGIF2-C20orf24A0A0A6YYL0 155 aa9.22□□□□□ -0.93
ERCC1-203ENST00000340192 TEX43Q6ZNM6 134 aa9.22□□□□□ -0.93
ERCC1-203ENST00000340192 ORAOV1Q8WV07 137 aa9.22□□□□□ -0.93
ERCC1-203ENST00000340192 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
ERCC1-203ENST00000340192 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
ERCC1-203ENST00000340192 ZC2HC1BQ5TFG8 222 aa9.21□□□□□ -0.94
ERCC1-203ENST00000340192 Q6ZN92 141 aa9.21□□□□□ -0.94
ERCC1-203ENST00000340192 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 IGIPA6NJ69 53 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
ERCC1-203ENST00000340192 J3QL48 77 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 UBE2D1P51668 147 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 LINC00173Q6ZV60 143 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 AMELXQ99217 191 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
ERCC1-203ENST00000340192 A0A087WZ39 114 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 NPSP0C0P6 89 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 COX19Q49B96 90 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
ERCC1-203ENST00000340192 VCX2Q9H322 139 aa9.19□□□□□ -0.94
ERCC1-203ENST00000340192 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
ERCC1-203ENST00000340192 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
ERCC1-203ENST00000340192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.18□□□□□ -0.94
ERCC1-203ENST00000340192 MT-ND6P03923 174 aa9.18□□□□□ -0.94
ERCC1-203ENST00000340192 G0S2P27469 103 aa9.18□□□□□ -0.94
ERCC1-203ENST00000340192 TOMM6Q96B49 74 aa9.18□□□□□ -0.94
ERCC1-203ENST00000340192 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
ERCC1-203ENST00000340192 F8WDY8 70 aa9.17□□□□□ -0.94
ERCC1-203ENST00000340192 APOC3P02656 99 aa9.17□□□□□ -0.94
ERCC1-203ENST00000340192 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
ERCC1-203ENST00000340192 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
ERCC1-203ENST00000340192 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
ERCC1-203ENST00000340192 NDUFA1O15239 70 aa9.16□□□□□ -0.94
ERCC1-203ENST00000340192 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
ERCC1-203ENST00000340192 PAPPA-AS1Q5QFB9 102 aa9.16□□□□□ -0.94
ERCC1-203ENST00000340192 TIMM17AQ99595 171 aa9.16□□□□□ -0.94
ERCC1-203ENST00000340192 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
ERCC1-203ENST00000340192 FAT3Q8TDW7 4589 aa9.16□□□□□ -0.94
ERCC1-203ENST00000340192 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
ERCC1-203ENST00000340192 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
ERCC1-203ENST00000340192 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
ERCC1-203ENST00000340192 SNAPINO95295 136 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 OXTP01178 125 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 ERASQ7Z444 233 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 FAM19A3Q7Z5A8 133 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 SVBPQ8N300 66 aa9.14□□□□□ -0.95
ERCC1-203ENST00000340192 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
ERCC1-203ENST00000340192 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
ERCC1-203ENST00000340192 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
ERCC1-203ENST00000340192 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
ERCC1-203ENST00000340192 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
ERCC1-203ENST00000340192 SMCO4Q9NRQ5 59 aa9.12□□□□□ -0.95
ERCC1-203ENST00000340192 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
ERCC1-203ENST00000340192 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
ERCC1-203ENST00000340192 HERVK_113P63121 156 aa9.11□□□□□ -0.95
ERCC1-203ENST00000340192 SEC11AP67812 179 aa9.11□□□□□ -0.95
ERCC1-203ENST00000340192 C2orf82Q6UX34 121 aa9.11□□□□□ -0.95
ERCC1-203ENST00000340192 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
ERCC1-203ENST00000340192 C9orf116Q5BN46 136 aaPredicted RBP9.1□□□□□ -0.95
ERCC1-203ENST00000340192 Q6ZRP5 223 aa9.1□□□□□ -0.95
ERCC1-203ENST00000340192 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
ERCC1-203ENST00000340192 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
ERCC1-203ENST00000340192 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
ERCC1-203ENST00000340192 PRSS2P07478 247 aa9.09□□□□□ -0.95
ERCC1-203ENST00000340192 TOMM7Q9P0U1 55 aa9.09□□□□□ -0.95
ERCC1-203ENST00000340192 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
ERCC1-203ENST00000340192 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
ERCC1-203ENST00000340192 CST9LQ9H4G1 147 aa9.08□□□□□ -0.96
ERCC1-203ENST00000340192 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
ERCC1-203ENST00000340192 CKS1BP61024 79 aa9.07□□□□□ -0.96
ERCC1-203ENST00000340192 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms