RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM136Q6ZRR5 245 aa8.25□□□□□ -1.09
NUDCD3-201ENST00000338427 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
NUDCD3-201ENST00000338427 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
NUDCD3-201ENST00000338427 LRP2P98164 4655 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 F8W036 122 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 APOMO95445 188 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 Q6ZRP5 223 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 ORAOV1Q8WV07 137 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 PRELID3AQ96N28 172 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 SMDT1Q9H4I9 107 aa8.24□□□□□ -1.09
NUDCD3-201ENST00000338427 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
NUDCD3-201ENST00000338427 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
NUDCD3-201ENST00000338427 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
NUDCD3-201ENST00000338427 IFITM10A6NMD0 228 aa8.22□□□□□ -1.09
NUDCD3-201ENST00000338427 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
NUDCD3-201ENST00000338427 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
NUDCD3-201ENST00000338427 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
NUDCD3-201ENST00000338427 S100A8P05109 93 aa8.21□□□□□ -1.1
NUDCD3-201ENST00000338427 ORMDL3Q8N138 153 aa8.21□□□□□ -1.1
NUDCD3-201ENST00000338427 IGLV4-3A0A075B6K6 122 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 PPBPP02775 128 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 RAB5AP20339 215 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
NUDCD3-201ENST00000338427 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 KRTAP7-1Q8IUC3 87 aa8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
NUDCD3-201ENST00000338427 MT-ND6P03923 174 aa8.18□□□□□ -1.1
NUDCD3-201ENST00000338427 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
NUDCD3-201ENST00000338427 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
NUDCD3-201ENST00000338427 ATP5L2Q7Z4Y8 100 aa8.18□□□□□ -1.1
NUDCD3-201ENST00000338427 RNF213Q63HN8 5207 aa8.17□□□□□ -1.1
NUDCD3-201ENST00000338427 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
NUDCD3-201ENST00000338427 NDUFA1O15239 70 aa8.17□□□□□ -1.1
NUDCD3-201ENST00000338427 IFI27P40305 119 aaPredicted RBP8.17□□□□□ -1.1
NUDCD3-201ENST00000338427 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
NUDCD3-201ENST00000338427 A0A087WZ39 114 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 FAM19A5Q7Z5A7 132 aaPredicted RBP8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 Q8N8P6 123 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 MAP1LC3AQ9H492 121 aa8.16□□□□□ -1.1
NUDCD3-201ENST00000338427 TGIF2-C20orf24A0A0A6YYL0 155 aa8.15□□□□□ -1.1
NUDCD3-201ENST00000338427 MT-ND4LP03901 98 aa8.15□□□□□ -1.1
NUDCD3-201ENST00000338427 UBE2D1P51668 147 aa8.15□□□□□ -1.1
NUDCD3-201ENST00000338427 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
NUDCD3-201ENST00000338427 C2orf66Q6UXQ4 117 aa8.15□□□□□ -1.1
NUDCD3-201ENST00000338427 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
NUDCD3-201ENST00000338427 F8WDY8 70 aa8.13□□□□□ -1.11
NUDCD3-201ENST00000338427 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
NUDCD3-201ENST00000338427 TEX43Q6ZNM6 134 aa8.13□□□□□ -1.11
NUDCD3-201ENST00000338427 AMELXQ99217 191 aa8.13□□□□□ -1.11
NUDCD3-201ENST00000338427 LPAP08519 4548 aa8.13□□□□□ -1.11
NUDCD3-201ENST00000338427 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 RAB14P61106 215 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 VCX2Q9H322 139 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 CYSLTR1Q9Y271 337 aa8.12□□□□□ -1.11
NUDCD3-201ENST00000338427 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-201ENST00000338427 LINC00469Q8N7U9 141 aa8.11□□□□□ -1.11
NUDCD3-201ENST00000338427 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
NUDCD3-201ENST00000338427 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
NUDCD3-201ENST00000338427 CTDSP1Q9GZU7 261 aa8.1□□□□□ -1.11
NUDCD3-201ENST00000338427 TRBV30A0A0K0K1B3 111 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 IFITM2Q01629 132 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 C6orf226Q5I0X4 101 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 Q6ZN92 141 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 PACRGQ96M98 296 aaPredicted RBP8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
NUDCD3-201ENST00000338427 M0QXV9 152 aa8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 UBE2BP63146 152 aa8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 CLLU1Q5K131 121 aa8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 ALKBH7Q9BT30 221 aaPredicted RBP8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 XAGE1AQ9HD64 81 aa8.07□□□□□ -1.12
NUDCD3-201ENST00000338427 TMEM218A2RU14 115 aa8.06□□□□□ -1.12
NUDCD3-201ENST00000338427 PRSS2P07478 247 aa8.06□□□□□ -1.12
NUDCD3-201ENST00000338427 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
NUDCD3-201ENST00000338427 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
NUDCD3-201ENST00000338427 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
NUDCD3-201ENST00000338427 H0Y9J4 135 aa8.05□□□□□ -1.12
NUDCD3-201ENST00000338427 CKS1BP61024 79 aa8.05□□□□□ -1.12
NUDCD3-201ENST00000338427 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms