RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 LINC00862A6NCI5 91 aa14.83□□□□□ -0.04
CDKN3-202ENST00000335183 PEA15Q15121 130 aa14.83□□□□□ -0.04
CDKN3-202ENST00000335183 RPL23P62829 140 aaKnown RBP14.82□□□□□ -0.04
CDKN3-202ENST00000335183 TMEM241Q24JQ0 296 aa14.82□□□□□ -0.04
CDKN3-202ENST00000335183 FAM74A3Q4VXF1 159 aa14.82□□□□□ -0.04
CDKN3-202ENST00000335183 IGHV3OR16-9A0A0B4J2B5 98 aa14.81□□□□□ -0.04
CDKN3-202ENST00000335183 F8WDY8 70 aa14.81□□□□□ -0.04
CDKN3-202ENST00000335183 TCAPO15273 167 aa14.81□□□□□ -0.04
CDKN3-202ENST00000335183 ADIRFQ15847 76 aa14.81□□□□□ -0.04
CDKN3-202ENST00000335183 C10orf25Q5T742 122 aa14.81□□□□□ -0.04
CDKN3-202ENST00000335183 FAM19A5Q7Z5A7 132 aaPredicted RBP14.81□□□□□ -0.04
CDKN3-202ENST00000335183 TRBV24-1A0A075B6N3 115 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 C9JQL5 133 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 TNFRSF6BO95407 300 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 RPL32P62910 135 aaKnown RBP14.8□□□□□ -0.04
CDKN3-202ENST00000335183 UNQ6190/PRO20217Q6UXQ8 127 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 KRTAP11-1Q8IUC1 163 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 FAM104AQ969W3 186 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 SMIM2Q9BVW6 85 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 SPANXA1Q9NS26 97 aa14.8□□□□□ -0.04
CDKN3-202ENST00000335183 LPAP08519 4548 aa14.79□□□□□ -0.04
CDKN3-202ENST00000335183 IFITM10A6NMD0 228 aa14.79□□□□□ -0.04
CDKN3-202ENST00000335183 HBBP68871 147 aa14.79□□□□□ -0.04
CDKN3-202ENST00000335183 SRSF3P84103 164 aaKnown RBP14.79□□□□□ -0.04
CDKN3-202ENST00000335183 GAGE2EQ4V326 116 aa14.79□□□□□ -0.04
CDKN3-202ENST00000335183 GAGE2DQ9UEU5 116 aa14.79□□□□□ -0.04
CDKN3-202ENST00000335183 SMIM27A0A1W2PRY6 76 aa14.78□□□□□ -0.04
CDKN3-202ENST00000335183 H0Y9J4 135 aa14.78□□□□□ -0.04
CDKN3-202ENST00000335183 C6orf48Q9UBA6 75 aa14.78□□□□□ -0.04
CDKN3-202ENST00000335183 A0A1B0GW15 77 aa14.77□□□□□ -0.05
CDKN3-202ENST00000335183 D6R8Y8 96 aa14.77□□□□□ -0.05
CDKN3-202ENST00000335183 TLX1NBP0CAT3 122 aa14.77□□□□□ -0.05
CDKN3-202ENST00000335183 RAB14P61106 215 aa14.76□□□□□ -0.05
CDKN3-202ENST00000335183 MRPS36P82909 103 aaKnown RBP14.76□□□□□ -0.05
CDKN3-202ENST00000335183 NAT8Q9UHE5 227 aa14.76□□□□□ -0.05
CDKN3-202ENST00000335183 TGIF2-C20orf24A0A0A6YYL0 155 aa14.75□□□□□ -0.05
CDKN3-202ENST00000335183 MRPL54Q6P161 138 aaKnown RBP14.75□□□□□ -0.05
CDKN3-202ENST00000335183 NPYP01303 97 aa14.74□□□□□ -0.05
CDKN3-202ENST00000335183 UBE2BP63146 152 aa14.74□□□□□ -0.05
CDKN3-202ENST00000335183 F8W036 122 aa14.72□□□□□ -0.05
CDKN3-202ENST00000335183 M0QXV9 152 aa14.72□□□□□ -0.05
CDKN3-202ENST00000335183 S100A8P05109 93 aa14.71□□□□□ -0.05
CDKN3-202ENST00000335183 IFI27P40305 119 aaPredicted RBP14.71□□□□□ -0.05
CDKN3-202ENST00000335183 IGLV1-50A0A075B6I6 118 aa14.7□□□□□ -0.06
CDKN3-202ENST00000335183 NDUFA5Q16718 116 aa14.7□□□□□ -0.06
CDKN3-202ENST00000335183 CLLU1Q5K131 121 aa14.7□□□□□ -0.06
CDKN3-202ENST00000335183 KRTAP7-1Q8IUC3 87 aa14.7□□□□□ -0.06
CDKN3-202ENST00000335183 KIAA0087Q14695 138 aa14.69□□□□□ -0.06
CDKN3-202ENST00000335183 KRTAP1-4P0C5Y4 121 aa14.68□□□□□ -0.06
CDKN3-202ENST00000335183 RAB5AP20339 215 aa14.68□□□□□ -0.06
CDKN3-202ENST00000335183 UBE2D1P51668 147 aa14.68□□□□□ -0.06
CDKN3-202ENST00000335183 C2orf82Q6UX34 121 aa14.68□□□□□ -0.06
CDKN3-202ENST00000335183 A0A1B0GXF2 115 aa14.67□□□□□ -0.06
CDKN3-202ENST00000335183 ATP6V1G1O75348 118 aa14.67□□□□□ -0.06
CDKN3-202ENST00000335183 PPBPP02775 128 aa14.67□□□□□ -0.06
CDKN3-202ENST00000335183 IFITM2Q01629 132 aa14.67□□□□□ -0.06
CDKN3-202ENST00000335183 LINC00242Q5T6M2 205 aa14.67□□□□□ -0.06
CDKN3-202ENST00000335183 TRBV30A0A0K0K1B3 111 aa14.66□□□□□ -0.06
CDKN3-202ENST00000335183 PACRGQ96M98 296 aaPredicted RBP14.66□□□□□ -0.06
CDKN3-202ENST00000335183 IGLV4-3A0A075B6K6 122 aa14.65□□□□□ -0.06
CDKN3-202ENST00000335183 ORMDL3Q8N138 153 aa14.65□□□□□ -0.06
CDKN3-202ENST00000335183 NDUFC2-KCTD14E9PQ53 114 aa14.64□□□□□ -0.07
CDKN3-202ENST00000335183 C9orf129Q5T035 196 aaKnown RBP14.64□□□□□ -0.07
CDKN3-202ENST00000335183 TMEM141Q96I45 108 aa14.64□□□□□ -0.07
CDKN3-202ENST00000335183 PYGO1Q9Y3Y4 419 aa14.64□□□□□ -0.07
CDKN3-202ENST00000335183 TMEM136Q6ZRR5 245 aa14.63□□□□□ -0.07
CDKN3-202ENST00000335183 PRELID3AQ96N28 172 aa14.63□□□□□ -0.07
CDKN3-202ENST00000335183 PRR4Q16378 134 aa14.62□□□□□ -0.07
CDKN3-202ENST00000335183 TEX43Q6ZNM6 134 aa14.62□□□□□ -0.07
CDKN3-202ENST00000335183 RPL13AP40429 203 aaKnown RBP14.61□□□□□ -0.07
CDKN3-202ENST00000335183 LOC389332A0A1B0GUA5 103 aa14.59□□□□□ -0.07
CDKN3-202ENST00000335183 ZC2HC1BQ5TFG8 222 aa14.59□□□□□ -0.07
CDKN3-202ENST00000335183 C2orf88Q9BSF0 95 aa14.59□□□□□ -0.07
CDKN3-202ENST00000335183 PRSS2P07478 247 aa14.58□□□□□ -0.08
CDKN3-202ENST00000335183 PNRC1Q12796 327 aaPredicted RBP14.58□□□□□ -0.08
CDKN3-202ENST00000335183 TOMM7Q9P0U1 55 aa14.58□□□□□ -0.08
CDKN3-202ENST00000335183 S100A1P23297 94 aa14.57□□□□□ -0.08
CDKN3-202ENST00000335183 ATP5L2Q7Z4Y8 100 aa14.57□□□□□ -0.08
CDKN3-202ENST00000335183 LINC01561Q8N1V8 128 aa14.57□□□□□ -0.08
CDKN3-202ENST00000335183 UQCC3Q6UW78 93 aa14.56□□□□□ -0.08
CDKN3-202ENST00000335183 Q6ZN92 141 aa14.56□□□□□ -0.08
CDKN3-202ENST00000335183 LINC00469Q8N7U9 141 aa14.56□□□□□ -0.08
CDKN3-202ENST00000335183 CKS1BP61024 79 aa14.55□□□□□ -0.08
CDKN3-202ENST00000335183 MAP1LC3AQ9H492 121 aa14.55□□□□□ -0.08
CDKN3-202ENST00000335183 CYSLTR1Q9Y271 337 aa14.55□□□□□ -0.08
CDKN3-202ENST00000335183 ZNF861PO60384 105 aa14.54□□□□□ -0.08
CDKN3-202ENST00000335183 C2orf66Q6UXQ4 117 aa14.54□□□□□ -0.08
CDKN3-202ENST00000335183 CARHSP1Q9Y2V2 147 aaKnown RBP14.54□□□□□ -0.08
CDKN3-202ENST00000335183 PRSS47A8MTI9 375 aa14.53□□□□□ -0.08
CDKN3-202ENST00000335183 LINC00173Q6ZV60 143 aa14.53□□□□□ -0.08
CDKN3-202ENST00000335183 VCX2Q9H322 139 aa14.53□□□□□ -0.08
CDKN3-202ENST00000335183 C22orf24Q9Y442 160 aa14.53□□□□□ -0.08
CDKN3-202ENST00000335183 C6orf226Q5I0X4 101 aa14.52□□□□□ -0.09
CDKN3-202ENST00000335183 XAGE1AQ9HD64 81 aa14.52□□□□□ -0.09
CDKN3-202ENST00000335183 LAMTOR2Q9Y2Q5 125 aa14.52□□□□□ -0.09
CDKN3-202ENST00000335183 NUPR1O60356 82 aa14.51□□□□□ -0.09
CDKN3-202ENST00000335183 AMELXQ99217 191 aa14.51□□□□□ -0.09
CDKN3-202ENST00000335183 Q8IZM0 81 aa14.5□□□□□ -0.09
CDKN3-202ENST00000335183 Q8N8P6 123 aa14.5□□□□□ -0.09
CDKN3-202ENST00000335183 ANAPC16Q96DE5 110 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms