RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 JMJD7-PLA2G4BH0Y9G9 81 aa10.84□□□□□ -0.67
C9orf47-201ENST00000334490 A0A096LNI7 61 aa10.84□□□□□ -0.67
C9orf47-201ENST00000334490 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
C9orf47-201ENST00000334490 LINC00308Q8TCZ7 52 aa10.84□□□□□ -0.67
C9orf47-201ENST00000334490 CITED1Q99966 193 aa10.83□□□□□ -0.68
C9orf47-201ENST00000334490 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
C9orf47-201ENST00000334490 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
C9orf47-201ENST00000334490 SPANXDQ9BXN6 97 aa10.83□□□□□ -0.68
C9orf47-201ENST00000334490 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
C9orf47-201ENST00000334490 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
C9orf47-201ENST00000334490 TAX1BP3O14907 124 aa10.83□□□□□ -0.68
C9orf47-201ENST00000334490 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
C9orf47-201ENST00000334490 TMEM256-PLSCR3K7ERE1 68 aa10.82□□□□□ -0.68
C9orf47-201ENST00000334490 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
C9orf47-201ENST00000334490 CDC42SE2Q9NRR3 84 aa10.82□□□□□ -0.68
C9orf47-201ENST00000334490 WFDC2Q14508 124 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 TEN1Q86WV5 123 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 G3V4G9 280 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 TRBV10-2A0A0K0K1G8 114 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 ACYP1P07311 99 aa10.81□□□□□ -0.68
C9orf47-201ENST00000334490 A0A0B4J2C4 111 aa10.8□□□□□ -0.68
C9orf47-201ENST00000334490 FHL2Q14192 279 aa10.8□□□□□ -0.68
C9orf47-201ENST00000334490 TP73-AS1Q9UF72 201 aa10.8□□□□□ -0.68
C9orf47-201ENST00000334490 C7orf33Q8WU49 177 aa10.79□□□□□ -0.68
C9orf47-201ENST00000334490 H3BT86 120 aa10.79□□□□□ -0.68
C9orf47-201ENST00000334490 UBE2D1P51668 147 aa10.79□□□□□ -0.68
C9orf47-201ENST00000334490 AGRNO00468 2067 aa10.78□□□□□ -0.68
C9orf47-201ENST00000334490 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
C9orf47-201ENST00000334490 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.68
C9orf47-201ENST00000334490 IGKV2D-28P01615 120 aa10.77□□□□□ -0.68
C9orf47-201ENST00000334490 PCSK5Q92824 1860 aa10.77□□□□□ -0.69
C9orf47-201ENST00000334490 HELZ2Q9BYK8 2649 aaKnown RBP10.77□□□□□ -0.69
C9orf47-201ENST00000334490 KRTAP24-1Q3LI83 254 aa10.77□□□□□ -0.69
C9orf47-201ENST00000334490 COX8CQ7Z4L0 72 aa10.77□□□□□ -0.69
C9orf47-201ENST00000334490 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
C9orf47-201ENST00000334490 CHCHD7Q9BUK0 85 aa10.76□□□□□ -0.69
C9orf47-201ENST00000334490 IGKV3D-7A0A0C4DH55 119 aa10.76□□□□□ -0.69
C9orf47-201ENST00000334490 IGIPA6NJ69 53 aa10.75□□□□□ -0.69
C9orf47-201ENST00000334490 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
C9orf47-201ENST00000334490 HTTP42858 3142 aa10.75□□□□□ -0.69
C9orf47-201ENST00000334490 BEAN1Q3B7T3 259 aa10.75□□□□□ -0.69
C9orf47-201ENST00000334490 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
C9orf47-201ENST00000334490 CYSRT1A8MQ03 144 aa10.74□□□□□ -0.69
C9orf47-201ENST00000334490 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
C9orf47-201ENST00000334490 TCL1BO95988 128 aa10.74□□□□□ -0.69
C9orf47-201ENST00000334490 PTH2Q96A98 100 aa10.74□□□□□ -0.69
C9orf47-201ENST00000334490 MAST4O15021 2626 aa10.74□□□□□ -0.69
C9orf47-201ENST00000334490 CENPEQ02224 2701 aa10.73□□□□□ -0.69
C9orf47-201ENST00000334490 IGLV4-60A0A075B6I1 120 aa10.73□□□□□ -0.69
C9orf47-201ENST00000334490 PDE6GP18545 87 aa10.73□□□□□ -0.69
C9orf47-201ENST00000334490 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
C9orf47-201ENST00000334490 CHD9Q3L8U1 2897 aa10.73□□□□□ -0.69
C9orf47-201ENST00000334490 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
C9orf47-201ENST00000334490 Q8IZM0 81 aa10.72□□□□□ -0.69
C9orf47-201ENST00000334490 H0Y9J4 135 aa10.72□□□□□ -0.69
C9orf47-201ENST00000334490 SLPIP03973 132 aa10.72□□□□□ -0.69
C9orf47-201ENST00000334490 TRAV23DV6A0A075B6W5 121 aa10.71□□□□□ -0.69
C9orf47-201ENST00000334490 TIMM17BO60830 172 aa10.71□□□□□ -0.69
C9orf47-201ENST00000334490 Q6ZSN1 163 aa10.71□□□□□ -0.69
C9orf47-201ENST00000334490 UNQ6190/PRO20217Q6UXQ8 127 aa10.71□□□□□ -0.69
C9orf47-201ENST00000334490 M0R378 163 aa10.71□□□□□ -0.7
C9orf47-201ENST00000334490 FHL3Q13643 280 aa10.71□□□□□ -0.7
C9orf47-201ENST00000334490 NHLRC4P0CG21 123 aaPredicted RBP10.7□□□□□ -0.7
C9orf47-201ENST00000334490 ATRQ13535 2644 aa10.7□□□□□ -0.7
C9orf47-201ENST00000334490 RPL37AP8A6NKH3 93 aa10.69□□□□□ -0.7
C9orf47-201ENST00000334490 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
C9orf47-201ENST00000334490 FOXI1Q12951 378 aa10.69□□□□□ -0.7
C9orf47-201ENST00000334490 FSHBP01225 129 aa10.68□□□□□ -0.7
C9orf47-201ENST00000334490 PPDPFQ9H3Y8 114 aa10.68□□□□□ -0.7
C9orf47-201ENST00000334490 A0A1B0GX51 115 aa10.68□□□□□ -0.7
C9orf47-201ENST00000334490 TRIAP1O43715 76 aa10.68□□□□□ -0.7
C9orf47-201ENST00000334490 WFDC10BQ8IUB3 73 aa10.67□□□□□ -0.7
C9orf47-201ENST00000334490 URB1-AS1Q96HZ7 61 aa10.67□□□□□ -0.7
C9orf47-201ENST00000334490 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
C9orf47-201ENST00000334490 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
C9orf47-201ENST00000334490 COX17Q14061 63 aa10.67□□□□□ -0.7
C9orf47-201ENST00000334490 MUC4Q99102 2169 aa10.66□□□□□ -0.7
C9orf47-201ENST00000334490 CFAP46Q8IYW2 2715 aa10.66□□□□□ -0.7
C9orf47-201ENST00000334490 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
C9orf47-201ENST00000334490 USP17L23D6RBM5 183 aa10.65□□□□□ -0.7
C9orf47-201ENST00000334490 EGFEM1PQ0D2K5 195 aa10.65□□□□□ -0.7
C9orf47-201ENST00000334490 Q6ZQY7 126 aa10.65□□□□□ -0.71
C9orf47-201ENST00000334490 CELA1Q9UNI1 258 aa10.65□□□□□ -0.71
C9orf47-201ENST00000334490 LINC00310P59036 64 aa10.64□□□□□ -0.71
C9orf47-201ENST00000334490 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
C9orf47-201ENST00000334490 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
C9orf47-201ENST00000334490 CSDC2Q9Y534 153 aaKnown RBP10.64□□□□□ -0.71
C9orf47-201ENST00000334490 MP68P56378 58 aa10.64□□□□□ -0.71
C9orf47-201ENST00000334490 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
C9orf47-201ENST00000334490 BPY2O14599 106 aa10.63□□□□□ -0.71
C9orf47-201ENST00000334490 COX6A2Q02221 97 aa10.63□□□□□ -0.71
C9orf47-201ENST00000334490 C11orf72Q8NBR9 251 aa10.63□□□□□ -0.71
C9orf47-201ENST00000334490 C6orf223Q8N319 242 aa10.63□□□□□ -0.71
C9orf47-201ENST00000334490 MUC7Q8TAX7 377 aa10.63□□□□□ -0.71
C9orf47-201ENST00000334490 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
C9orf47-201ENST00000334490 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
C9orf47-201ENST00000334490 A0A1B0GUV1 79 aa10.62□□□□□ -0.71
C9orf47-201ENST00000334490 DHRS4-AS1Q9P1J3 65 aa10.61□□□□□ -0.71
C9orf47-201ENST00000334490 MKI67P46013 3256 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms