RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DAZ4Q86SG3 579 aaKnown RBP0.83□□□□□ -2.28
LINC00643-201ENST00000334389 OR8I2Q8N0Y5 310 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 ZFP82Q8N141 532 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TMEM252Q8N6L7 170 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 GTSF1Q8WW33 167 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 IFI27L1Q96BM0 104 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 DIRAS2Q96HU8 199 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 MAP1LC3CQ9BXW4 147 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 NPCDR1Q9BY65 106 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PARP12Q9H0J9 701 aaKnown RBP0.83□□□□□ -2.28
LINC00643-201ENST00000334389 GAGE2DQ9UEU5 116 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 LAMTOR3Q9UHA4 124 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 CYSLTR1Q9Y271 337 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 HILPDAQ9Y5L2 63 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 SORL1Q92673 2214 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TRBV7-3A0A075B6L6 115 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 IGHV3-16A0A0C4DH30 117 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 A0A0G2JRQ6 117 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 A4D1N5 150 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 K7EQD1 137 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 K7EQM0 130 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 SIX6O95475 246 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 RLN1P04808 185 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 GPX1P07203 203 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PRSS2P07478 247 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 VPREB1P12018 145 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 UBE2D1P51668 147 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TMEM258P61165 79 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 SLC38A11Q08AI6 406 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PPP1R1AQ13522 171 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 CFAP126Q5VTH2 177 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 IGFL4Q6B9Z1 124 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 EBLN2Q6P2I7 272 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PRNTQ86SH4 94 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PRR15Q8IV56 129 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 AMN1Q8IY45 258 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 STPG4Q8N801 248 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 OR10AG1Q8NH19 301 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 URB1-AS1Q96HZ7 61 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 DUX5Q96PT3 197 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 C20orf78Q9BR46 151 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 HDHD3Q9BSH5 251 aaPredicted RBP0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TPPP3Q9BW30 176 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 OSTCQ9NRP0 149 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 MRPL35Q9NZE8 188 aaKnown RBP0.83□□□□□ -2.28
LINC00643-201ENST00000334389 GSKIPQ9P0R6 139 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 RPH3ALQ9UNE2 315 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 LAMA1P25391 3075 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 IGKV1OR2-108A0A075B7D4 117 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 IGLV5-45A0A087WSX0 123 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.83□□□□□ -2.28
LINC00643-201ENST00000334389 LOC107984640A0A0U1RRK4 108 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 hDV102S1A0JD36 115 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 MAP1LC3B2A6NCE7 125 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 RPL37AP8A6NKH3 93 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 ZNF815PA8K554 130 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 G3V318 75 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 AGPAT2O15120 278 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 CST7O76096 145 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 S100A2P29034 98 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 HSD52Q0P140 79 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 NEDD8Q15843 81 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 ECSCRQ19T08 205 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 C10orf113Q5VZT2 155 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 CYB561D1Q8N8Q1 229 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 C20orf24Q9BUV8 137 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 MAP1LC3BQ9GZQ8 125 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 PSENENQ9NZ42 101 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 ROS1P08922 2347 aa0.83□□□□□ -2.28
LINC00643-201ENST00000334389 TRAV12-1A0A0B4J245 112 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 A0A0J9YXY3 114 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 TRBV30A0A0K0K1B3 111 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 KANTRA0A1W2PQU2 76 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 NCBP2LA6PVI3 153 aaKnown RBP0.82□□□□□ -2.28
LINC00643-201ENST00000334389 H7C1H1 209 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 TRGC2P03986 189 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 ACYP1P07311 99 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 RNASE4P34096 147 aaKnown RBP0.82□□□□□ -2.28
LINC00643-201ENST00000334389 AKR1C3P42330 323 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 BAGE2Q86Y30 109 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 FAM218AQ96MZ4 157 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 NDFIP1Q9BT67 221 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 MAP1LC3AQ9H492 121 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 PRO0628Q9UI54 55 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 LOC400499M0QZD8 3231 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 A0A1B0GW54 56 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 GAGE12BA1L429 117 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 GAGE12HA6NDE8 117 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 RBFOX3A6NFN3 312 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 ZNF561-AS1K7EIQ3 104 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 TCRAP04437 139 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 IAPPP10997 89 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 RPL35P42766 123 aaKnown RBP0.82□□□□□ -2.28
LINC00643-201ENST00000334389 CAMPP49913 170 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 CNN1P51911 297 aaKnown RBP0.82□□□□□ -2.28
LINC00643-201ENST00000334389 CCL20P78556 96 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 OR5I1Q13606 314 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 Q6ZRG5 221 aa0.82□□□□□ -2.28
LINC00643-201ENST00000334389 TMEM136Q6ZRR5 245 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms