RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 PRORYQ9H606 182 aa12.99□□□□□ -0.33
SOCS3-201ENST00000330871 RBMY1BA6NDE4 496 aaKnown RBP12.99□□□□□ -0.33
SOCS3-201ENST00000330871 RBMY1EA6NEQ0 496 aaKnown RBP12.99□□□□□ -0.33
SOCS3-201ENST00000330871 RBMY1DP0C7P1 496 aaKnown RBP12.99□□□□□ -0.33
SOCS3-201ENST00000330871 RPL36AP83881 106 aaKnown RBP12.99□□□□□ -0.33
SOCS3-201ENST00000330871 RPL36ALQ969Q0 106 aaKnown RBP12.99□□□□□ -0.33
SOCS3-201ENST00000330871 ENHOQ6UWT2 76 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 CSPG4Q6UVK1 2322 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 NDUFC2O95298 119 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 PF4P02776 101 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
SOCS3-201ENST00000330871 TOMM7Q9P0U1 55 aa12.97□□□□□ -0.33
SOCS3-201ENST00000330871 C1orf43Q9BWL3 253 aa12.96□□□□□ -0.33
SOCS3-201ENST00000330871 MSMBP08118 114 aa12.96□□□□□ -0.34
SOCS3-201ENST00000330871 SS18Q15532 418 aa12.96□□□□□ -0.34
SOCS3-201ENST00000330871 IGHV3-53P01767 116 aa12.95□□□□□ -0.34
SOCS3-201ENST00000330871 XCL1P47992 114 aa12.95□□□□□ -0.34
SOCS3-201ENST00000330871 LINC00158P58513 81 aa12.95□□□□□ -0.34
SOCS3-201ENST00000330871 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
SOCS3-201ENST00000330871 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
SOCS3-201ENST00000330871 PRO0628Q9UI54 55 aa12.94□□□□□ -0.34
SOCS3-201ENST00000330871 TMEM89A2RUT3 159 aa12.94□□□□□ -0.34
SOCS3-201ENST00000330871 H0YGX0 51 aa12.94□□□□□ -0.34
SOCS3-201ENST00000330871 J3QLI3 93 aa12.94□□□□□ -0.34
SOCS3-201ENST00000330871 CCKP06307 115 aa12.94□□□□□ -0.34
SOCS3-201ENST00000330871 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
SOCS3-201ENST00000330871 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
SOCS3-201ENST00000330871 AVPP01185 164 aa12.92□□□□□ -0.34
SOCS3-201ENST00000330871 CCL18P55774 89 aa12.92□□□□□ -0.34
SOCS3-201ENST00000330871 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
SOCS3-201ENST00000330871 CCL19Q99731 98 aa12.92□□□□□ -0.34
SOCS3-201ENST00000330871 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
SOCS3-201ENST00000330871 ORMDL1Q9P0S3 153 aa12.91□□□□□ -0.34
SOCS3-201ENST00000330871 ZANQ9Y493 2812 aa12.91□□□□□ -0.34
SOCS3-201ENST00000330871 IGKV3OR2-268A0A0C4DH90 116 aa12.9□□□□□ -0.34
SOCS3-201ENST00000330871 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
SOCS3-201ENST00000330871 H7BZZ5 65 aa12.9□□□□□ -0.35
SOCS3-201ENST00000330871 PAX4O43316 350 aa12.9□□□□□ -0.35
SOCS3-201ENST00000330871 IGHV4-59P01825 116 aa12.9□□□□□ -0.35
SOCS3-201ENST00000330871 WFDC11Q8NEX6 87 aa12.9□□□□□ -0.35
SOCS3-201ENST00000330871 DEFB131AP59861 70 aa12.89□□□□□ -0.35
SOCS3-201ENST00000330871 NTM-AS1Q6ZSK4 140 aa12.89□□□□□ -0.35
SOCS3-201ENST00000330871 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
SOCS3-201ENST00000330871 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
SOCS3-201ENST00000330871 CENPEQ02224 2701 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 SERP1Q9Y6X1 66 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 B4DSR2 109 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 FAM19A3Q7Z5A8 133 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
SOCS3-201ENST00000330871 RNASE1P07998 156 aaKnown RBP12.87□□□□□ -0.35
SOCS3-201ENST00000330871 SNURFQ9Y675 71 aa12.87□□□□□ -0.35
SOCS3-201ENST00000330871 UTP20O75691 2785 aaKnown RBP12.87□□□□□ -0.35
SOCS3-201ENST00000330871 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
SOCS3-201ENST00000330871 S100A7L2Q5SY68 101 aa12.86□□□□□ -0.35
SOCS3-201ENST00000330871 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
SOCS3-201ENST00000330871 GNLYP22749 145 aa12.85□□□□□ -0.35
SOCS3-201ENST00000330871 LYPD5Q6UWN5 251 aa12.85□□□□□ -0.35
SOCS3-201ENST00000330871 Q6ZTI0 123 aa12.85□□□□□ -0.35
SOCS3-201ENST00000330871 A8MTW9 85 aa12.84□□□□□ -0.35
SOCS3-201ENST00000330871 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
SOCS3-201ENST00000330871 FP248Q71RG6 208 aaPredicted RBP12.84□□□□□ -0.35
SOCS3-201ENST00000330871 RMI2Q96E14 147 aa12.83□□□□□ -0.36
SOCS3-201ENST00000330871 UBE2E2Q96LR5 201 aa12.83□□□□□ -0.36
SOCS3-201ENST00000330871 C11orf68Q9H3H3 251 aaKnown RBP12.83□□□□□ -0.36
SOCS3-201ENST00000330871 NIPBLQ6KC79 2804 aaeCLIP12.83□□□□□ -0.36
SOCS3-201ENST00000330871 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
SOCS3-201ENST00000330871 C16orf95Q9H693 158 aa12.82□□□□□ -0.36
SOCS3-201ENST00000330871 ITPR1Q14643 2758 aa12.82□□□□□ -0.36
SOCS3-201ENST00000330871 UBL5Q9BZL1 73 aa12.82□□□□□ -0.36
SOCS3-201ENST00000330871 LINC00474Q9P2X8 69 aa12.81□□□□□ -0.36
SOCS3-201ENST00000330871 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
SOCS3-201ENST00000330871 TRGV1A0A0A0MS02 117 aa12.79□□□□□ -0.36
SOCS3-201ENST00000330871 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
SOCS3-201ENST00000330871 JMJD7-PLA2G4BH0Y9G9 81 aa12.79□□□□□ -0.36
SOCS3-201ENST00000330871 UBE2L6O14933 153 aa12.79□□□□□ -0.36
SOCS3-201ENST00000330871 PRR3P79522 188 aaKnown RBP12.79□□□□□ -0.36
SOCS3-201ENST00000330871 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
SOCS3-201ENST00000330871 F8WEM9 126 aa12.78□□□□□ -0.36
SOCS3-201ENST00000330871 TMEM86BQ8N661 226 aa12.78□□□□□ -0.36
SOCS3-201ENST00000330871 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
SOCS3-201ENST00000330871 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.36
SOCS3-201ENST00000330871 TRAV7A0A075B6U4 112 aa12.77□□□□□ -0.37
SOCS3-201ENST00000330871 A0A0U1RQV1 116 aa12.76□□□□□ -0.37
SOCS3-201ENST00000330871 SLURP1P55000 103 aa12.76□□□□□ -0.37
SOCS3-201ENST00000330871 POLQO75417 2590 aa12.76□□□□□ -0.37
SOCS3-201ENST00000330871 Q8N814 137 aa12.76□□□□□ -0.37
SOCS3-201ENST00000330871 SMIM26A0A096LP01 95 aa12.75□□□□□ -0.37
SOCS3-201ENST00000330871 FBN2P35556 2912 aa12.75□□□□□ -0.37
SOCS3-201ENST00000330871 M0R2N4 97 aa12.75□□□□□ -0.37
SOCS3-201ENST00000330871 BRK1Q8WUW1 75 aa12.75□□□□□ -0.37
SOCS3-201ENST00000330871 ZNF702PQ9H963 129 aa12.75□□□□□ -0.37
SOCS3-201ENST00000330871 A0A096LNT2 108 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 IBA57-AS1B1ANH7 110 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 K7EQD1 137 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 HAMPP81172 84 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
SOCS3-201ENST00000330871 DEFB136Q30KP8 78 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms