RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 NDUFA1O15239 70 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 MSMBP08118 114 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 LINC00482Q8N8I6 264 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 EDA2RQ9HAV5 297 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 NF1P21359 2839 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 TRGV1A0A0A0MS02 117 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
VMA21-201ENST00000330374 GNLYP22749 145 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 LINC00242Q5T6M2 205 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 IGKV3D-7A0A0C4DH55 119 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 Q6ZVQ6 151 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 ZFYVE26Q68DK2 2539 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 SDIM1Q6ZPB5 146 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 BRI3O95415 125 aa5.67□□□□□ -1.5
VMA21-201ENST00000330374 TEX15Q9BXT5 2789 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 ATP5G1P05496 136 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
VMA21-201ENST00000330374 CFAP46Q8IYW2 2715 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 C10orf105Q8TEF2 133 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 VPREB3Q9UKI3 123 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 DEFB121Q5J5C9 76 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
VMA21-201ENST00000330374 HERVK_113P63121 156 aa5.65□□□□□ -1.5
VMA21-201ENST00000330374 PKD1L2Q7Z442 2459 aa5.65□□□□□ -1.5
VMA21-201ENST00000330374 C3orf22Q8N5N4 141 aa5.65□□□□□ -1.5
VMA21-201ENST00000330374 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
VMA21-201ENST00000330374 TIMM17BO60830 172 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 DNAL4O96015 105 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 DYNLRB2Q8TF09 96 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 PFN2P35080 140 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 LINC00158P58513 81 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 C9orf129Q5T035 196 aaKnown RBP5.65□□□□□ -1.51
VMA21-201ENST00000330374 OR13C6PQ8NH95 151 aa5.65□□□□□ -1.51
VMA21-201ENST00000330374 CRPP02741 224 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 SLPIP03973 132 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 ACYP1P07311 99 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 BEAN1Q3B7T3 259 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 MIR7-3HGQ8N6C7 128 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 A0A087WZ39 114 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 A0A087WVE0 104 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
VMA21-201ENST00000330374 A0A087WYN8 130 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 UBE2L6O14933 153 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 Q6ZTI0 123 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 NBEAL2Q6ZNJ1 2754 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 NBL1P41271 181 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 UCNP55089 124 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 DOPEY1Q5JWR5 2465 aa5.63□□□□□ -1.51
VMA21-201ENST00000330374 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 B4DSR2 109 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 INSP01308 110 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
VMA21-201ENST00000330374 NTM-AS1Q6ZSK4 140 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
VMA21-201ENST00000330374 MAP6D1Q9H9H5 199 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 SND1-IT1Q9HBX3 110 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 C22orf24Q9Y442 160 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 UQCRQO14949 82 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 LOC100131303A0A0U1RQF7 123 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 NCR3O14931 201 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 TRACP01848 142 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 MTORP42345 2549 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 LECT2O14960 151 aa5.62□□□□□ -1.51
VMA21-201ENST00000330374 PAX4O43316 350 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 AKAP9Q99996 3911 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 A0A1B0GX51 115 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 COPS9Q8WXC6 57 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 DNAJC30Q96LL9 226 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 C5orf38Q86SI9 138 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 PIEZO1Q92508 2521 aa5.61□□□□□ -1.51
VMA21-201ENST00000330374 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
VMA21-201ENST00000330374 NOP10Q9NPE3 64 aaKnown RBP5.6□□□□□ -1.51
VMA21-201ENST00000330374 SETXQ7Z333 2677 aaKnown RBP5.6□□□□□ -1.51
VMA21-201ENST00000330374 PLA2G2AP14555 144 aa5.6□□□□□ -1.51
VMA21-201ENST00000330374 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
VMA21-201ENST00000330374 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
VMA21-201ENST00000330374 COX7CP15954 63 aa5.6□□□□□ -1.51
VMA21-201ENST00000330374 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
VMA21-201ENST00000330374 GCN1Q92616 2671 aaKnown RBP5.59□□□□□ -1.51
VMA21-201ENST00000330374 IGKV2-28A0A075B6P5 120 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 TRGV2A0A075B6R0 118 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 F5H768 121 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 IGKV2D-28P01615 120 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 IL17DQ8TAD2 202 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
VMA21-201ENST00000330374 K7EQD1 137 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms