RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
SMC1A-201ENST00000322213 A0A096LNJ9 63 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 COX7BP24311 80 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 FHL3Q13643 280 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 CRIP2P52943 208 aaPredicted RBP5.27□□□□□ -1.57
SMC1A-201ENST00000322213 ZFAND2AQ8N6M9 145 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 IGHV4OR15-8A0A075B7B6 117 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 A0A087WW49 117 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 IGIPA6NJ69 53 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 GYPEP15421 78 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 COX8CQ7Z4L0 72 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
SMC1A-201ENST00000322213 CEMP1Q6PRD7 247 aaPredicted RBP5.27□□□□□ -1.57
SMC1A-201ENST00000322213 C1orf229Q6ZS94 237 aaPredicted RBP5.27□□□□□ -1.57
SMC1A-201ENST00000322213 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
SMC1A-201ENST00000322213 ZFAND3Q9H8U3 227 aa5.26□□□□□ -1.57
SMC1A-201ENST00000322213 ETDCA0A1B0GVM5 59 aa5.26□□□□□ -1.57
SMC1A-201ENST00000322213 BRCA2P51587 3418 aa5.26□□□□□ -1.57
SMC1A-201ENST00000322213 CRYGDP07320 174 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 SMIM11BQ8TCY0 68 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 GAS8-AS1O95177 125 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 SMAD5-AS1Q9Y6J3 95 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 VPREB1P12018 145 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 SBSPONQ8IVN8 264 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 FSTL3O95633 263 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 RMI2Q96E14 147 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 IGLV2-18A0A075B6J9 118 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 PSMG3-AS1Q96PY0 264 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 PRYO14603 147 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 ZNF292O60281 2723 aa5.25□□□□□ -1.57
SMC1A-201ENST00000322213 SEM1Q6ZVN7 128 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 SLPIP03973 132 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 UNQ9165/PRO28630Q6UXU0 137 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 PSCAO43653 123 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 RNASE3P12724 160 aaKnown RBP5.24□□□□□ -1.57
SMC1A-201ENST00000322213 IGLV10-54A0A075B6I4 117 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 ODF3BA8MYP8 253 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 BRI3O95415 125 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 NBEAL2Q6ZNJ1 2754 aa5.24□□□□□ -1.57
SMC1A-201ENST00000322213 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
SMC1A-201ENST00000322213 POLR2KP53803 58 aaKnown RBP5.24□□□□□ -1.57
SMC1A-201ENST00000322213 A8MZ25 164 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 CXCL6P80162 114 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 TSPEAR-AS2P59090 65 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 CLPSL1A2RUU4 121 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 MGAM2Q2M2H8 2515 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 KLLNB2CW77 178 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 LAMA3Q16787 3333 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 STAB2Q8WWQ8 2551 aa5.23□□□□□ -1.57
SMC1A-201ENST00000322213 ITPR3Q14573 2671 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 Q8N814 137 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 USP34Q70CQ2 3546 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 TRBV7-6A0A0J9YX20 115 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 TMEM89A2RUT3 159 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 C4orf3Q8WVX3 66 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 SPAG11BQ08648 103 aa5.22□□□□□ -1.57
SMC1A-201ENST00000322213 LY6LH3BQJ8 138 aa5.21□□□□□ -1.57
SMC1A-201ENST00000322213 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.57
SMC1A-201ENST00000322213 FREM2Q5SZK8 3169 aa5.21□□□□□ -1.57
SMC1A-201ENST00000322213 PRUNE2Q8WUY3 3088 aa5.21□□□□□ -1.57
SMC1A-201ENST00000322213 IGFL2Q6UWQ7 119 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 APRG1Q8IVJ8 170 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 MUC7Q8TAX7 377 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 SLURP1P55000 103 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 DEFB1P60022 68 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 DEFB136Q30KP8 78 aa5.21□□□□□ -1.58
SMC1A-201ENST00000322213 TNFRSF13BO14836 293 aaPredicted RBP5.2□□□□□ -1.58
SMC1A-201ENST00000322213 IGF1P05019 195 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 A0A096LPF7 62 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 C22orf34Q6ZV56 151 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 A0A087WYN8 130 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 CCL24O00175 119 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 PRR9Q5T870 116 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 POM121L12Q8N7R1 296 aa5.2□□□□□ -1.58
SMC1A-201ENST00000322213 CD164Q04900 197 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 AMELXQ99217 191 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 TRBV10-3A0A0K0K1G6 114 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 ESRGQ1W209 222 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 FAM19A4Q96LR4 140 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 C11orf21Q9P2W6 132 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 REV3LO60673 3130 aa5.19□□□□□ -1.58
SMC1A-201ENST00000322213 LINC00336Q6ZUF6 198 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 IGKV4-1P06312 121 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 A0A087WVE0 104 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 EBI3Q14213 229 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 UBE2DNLQ8IWF7 75 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 TRBV6-4A0A1B0GX49 114 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 PLAC8L1A1L4L8 177 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 H0Y9J4 135 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 WDFY3Q8IZQ1 3526 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 MSMPQ1L6U9 139 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 WFDC10BQ8IUB3 73 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 Q8N3U1 123 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 SOSTDC1Q6X4U4 206 aa5.18□□□□□ -1.58
SMC1A-201ENST00000322213 PSPHP1O15172 72 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms