RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 ZNF415Q09FC8 603 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 TMEM61Q8N0U2 210 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 Q8N6K4 173 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 IGHG2P01859 326 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 C9orf47Q6ZRZ4 202 aa6.85□□□□□ -1.31
CAPN3-201ENST00000318023 A0A087WWL8 130 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 F5H697 171 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 DEFB1P60022 68 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 TMEM141Q96I45 108 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 TIMM17AQ99595 171 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 SDHAF1A6NFY7 115 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 BAALC-AS2P0C853 105 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
CAPN3-201ENST00000318023 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 FAM223BA6NKX1 122 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 GNRH2O43555 120 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
CAPN3-201ENST00000318023 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 Q9HAA7 133 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
CAPN3-201ENST00000318023 MIAQ16674 131 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 Q8N2B8 174 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 SLURP1P55000 103 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 C16orf92Q96LL3 132 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 C22orf24Q9Y442 160 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 V9GYY9 64 aa6.82□□□□□ -1.32
CAPN3-201ENST00000318023 TMEM243Q9BU79 118 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 CCL24O00175 119 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 DNAL4O96015 105 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 CTSGP08311 255 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 A0A0J9YX75 114 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
CAPN3-201ENST00000318023 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
CAPN3-201ENST00000318023 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
CAPN3-201ENST00000318023 WFDC9Q8NEX5 89 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 NPBQ8NG41 125 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 COX7A2LO14548 114 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 VCYO14598 125 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
CAPN3-201ENST00000318023 IGLV11-55A0A075B6I3 123 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 RPL11P62913 178 aaKnown RBP6.79□□□□□ -1.32
CAPN3-201ENST00000318023 ZNF625Q96I27 306 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-201ENST00000318023 IGHV4OR15-8A0A075B7B6 117 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 A0A087WW49 117 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 BUB3O43684 328 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 PPP1R17O96001 155 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
CAPN3-201ENST00000318023 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
CAPN3-201ENST00000318023 PSMB8P28062 276 aa6.78□□□□□ -1.32
CAPN3-201ENST00000318023 RNASE4P34096 147 aaKnown RBP6.78□□□□□ -1.32
CAPN3-201ENST00000318023 LINC00315P59091 139 aa6.78□□□□□ -1.32
CAPN3-201ENST00000318023 TRAV23DV6A0A075B6W5 121 aa6.78□□□□□ -1.32
CAPN3-201ENST00000318023 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
CAPN3-201ENST00000318023 IGLV4-3A0A075B6K6 122 aa6.77□□□□□ -1.32
CAPN3-201ENST00000318023 GHRHP01286 108 aa6.77□□□□□ -1.32
CAPN3-201ENST00000318023 BEAN1Q3B7T3 259 aa6.77□□□□□ -1.32
CAPN3-201ENST00000318023 C15orf32Q32M92 178 aa6.77□□□□□ -1.33
CAPN3-201ENST00000318023 IGKV3-7A0A075B6H7 116 aa6.77□□□□□ -1.33
CAPN3-201ENST00000318023 CLEC19AQ6UXS0 136 aa6.77□□□□□ -1.33
CAPN3-201ENST00000318023 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
CAPN3-201ENST00000318023 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-201ENST00000318023 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 TRAV21A0A0B4J279 112 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 F6UB75 175 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 LINC00474Q9P2X8 69 aa6.76□□□□□ -1.33
CAPN3-201ENST00000318023 TRAV12-2A0A075B6T6 113 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 CFHR3Q02985 330 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 Q6JHZ5 121 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 NDUFC2O95298 119 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
CAPN3-201ENST00000318023 LINC00482Q8N8I6 264 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 IL17DQ8TAD2 202 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 RNF5Q99942 180 aa6.75□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1BA6NDE4 496 aaKnown RBP6.74□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1EA6NEQ0 496 aaKnown RBP6.74□□□□□ -1.33
CAPN3-201ENST00000318023 IGLV1-40P01703 118 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1DP0C7P1 496 aaKnown RBP6.74□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
CAPN3-201ENST00000318023 UBE2D4Q9Y2X8 147 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 VSIG2Q96IQ7 327 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 UBE2E2Q96LR5 201 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms