RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PSCAO43653 123 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 TNP2Q05952 138 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 LINC00336Q6ZUF6 198 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 S100A6P06703 90 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 PRSS1P07477 247 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 COX6A2Q02221 97 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 WFDC2Q14508 124 aa8.35□□□□□ -1.07
CHMP2A-201ENST00000312547 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
CHMP2A-201ENST00000312547 A0A087WTM6 91 aa8.34□□□□□ -1.07
CHMP2A-201ENST00000312547 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
CHMP2A-201ENST00000312547 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
CHMP2A-201ENST00000312547 SEC11AP67812 179 aa8.34□□□□□ -1.07
CHMP2A-201ENST00000312547 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
CHMP2A-201ENST00000312547 COX7A2LO14548 114 aa8.33□□□□□ -1.08
CHMP2A-201ENST00000312547 SNRPEP62304 92 aaKnown RBP8.33□□□□□ -1.08
CHMP2A-201ENST00000312547 HERVK_113P63121 156 aa8.33□□□□□ -1.08
CHMP2A-201ENST00000312547 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
CHMP2A-201ENST00000312547 A0A087WZ39 114 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 ODF1Q14990 250 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
CHMP2A-201ENST00000312547 F8VRH5 84 aa8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 LECT2O14960 151 aa8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
CHMP2A-201ENST00000312547 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CHMP2A-201ENST00000312547 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
CHMP2A-201ENST00000312547 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
CHMP2A-201ENST00000312547 S100A2P29034 98 aa8.3□□□□□ -1.08
CHMP2A-201ENST00000312547 CHAC1Q9BUX1 264 aa8.3□□□□□ -1.08
CHMP2A-201ENST00000312547 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 H0Y8G0 127 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 Q8N814 137 aa8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-201ENST00000312547 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
CHMP2A-201ENST00000312547 MALP21145 153 aa8.28□□□□□ -1.08
CHMP2A-201ENST00000312547 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
CHMP2A-201ENST00000312547 PKD1P98161 4303 aa8.28□□□□□ -1.08
CHMP2A-201ENST00000312547 EREGO14944 169 aa8.27□□□□□ -1.09
CHMP2A-201ENST00000312547 APOMO95445 188 aa8.27□□□□□ -1.09
CHMP2A-201ENST00000312547 KRTDAPP60985 99 aa8.27□□□□□ -1.09
CHMP2A-201ENST00000312547 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
CHMP2A-201ENST00000312547 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
CHMP2A-201ENST00000312547 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
CHMP2A-201ENST00000312547 OR10D4PQ8NGN7 298 aa8.26□□□□□ -1.09
CHMP2A-201ENST00000312547 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 hDV102S1A0JD36 115 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 H3BRM9 83 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 DPM2O94777 84 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 SLPIP03973 132 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 PLNP26678 52 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 NTN5Q8WTR8 489 aaPredicted RBP8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 ORAOV1Q8WV07 137 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
CHMP2A-201ENST00000312547 IGKCP01834 107 aa8.24□□□□□ -1.09
CHMP2A-201ENST00000312547 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
CHMP2A-201ENST00000312547 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
CHMP2A-201ENST00000312547 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
CHMP2A-201ENST00000312547 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
CHMP2A-201ENST00000312547 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
CHMP2A-201ENST00000312547 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
CHMP2A-201ENST00000312547 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
CHMP2A-201ENST00000312547 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
CHMP2A-201ENST00000312547 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 C20orf202A1L168 122 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 Q8IZM0 81 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
CHMP2A-201ENST00000312547 F8WDY8 70 aa8.21□□□□□ -1.1
CHMP2A-201ENST00000312547 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHMP2A-201ENST00000312547 CDPF1Q6NVV7 123 aa8.21□□□□□ -1.1
CHMP2A-201ENST00000312547 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
CHMP2A-201ENST00000312547 AKR1D1P51857 326 aa8.19□□□□□ -1.1
CHMP2A-201ENST00000312547 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
CHMP2A-201ENST00000312547 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
CHMP2A-201ENST00000312547 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
CHMP2A-201ENST00000312547 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
CHMP2A-201ENST00000312547 PRSS2P07478 247 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms