RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 MAST4O15021 2626 aa9.81□□□□□ -0.84
NPAS4-201ENST00000311034 IGLV10-54A0A075B6I4 117 aa9.81□□□□□ -0.84
NPAS4-201ENST00000311034 M0QXV9 152 aa9.81□□□□□ -0.84
NPAS4-201ENST00000311034 RBMY1BA6NDE4 496 aaKnown RBP9.81□□□□□ -0.84
NPAS4-201ENST00000311034 RBMY1EA6NEQ0 496 aaKnown RBP9.81□□□□□ -0.84
NPAS4-201ENST00000311034 RBMY1DP0C7P1 496 aaKnown RBP9.81□□□□□ -0.84
NPAS4-201ENST00000311034 CITED2Q99967 270 aaPredicted RBP9.81□□□□□ -0.84
NPAS4-201ENST00000311034 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
NPAS4-201ENST00000311034 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
NPAS4-201ENST00000311034 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
NPAS4-201ENST00000311034 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
NPAS4-201ENST00000311034 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
NPAS4-201ENST00000311034 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
NPAS4-201ENST00000311034 ATP5G1P05496 136 aa9.79□□□□□ -0.84
NPAS4-201ENST00000311034 PAX4O43316 350 aa9.79□□□□□ -0.84
NPAS4-201ENST00000311034 BRI3O95415 125 aa9.78□□□□□ -0.84
NPAS4-201ENST00000311034 NDUFA1O15239 70 aa9.77□□□□□ -0.84
NPAS4-201ENST00000311034 Q6Q795 121 aa9.77□□□□□ -0.85
NPAS4-201ENST00000311034 SHISA2Q6UWI4 295 aa9.77□□□□□ -0.85
NPAS4-201ENST00000311034 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
NPAS4-201ENST00000311034 XCL1P47992 114 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
NPAS4-201ENST00000311034 LINC00242Q5T6M2 205 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
NPAS4-201ENST00000311034 COX7A2LO14548 114 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 INSP01308 110 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 PEMTQ9UBM1 199 aa9.76□□□□□ -0.85
NPAS4-201ENST00000311034 HERVK_113P63121 156 aa9.75□□□□□ -0.85
NPAS4-201ENST00000311034 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
NPAS4-201ENST00000311034 SLPIP03973 132 aa9.74□□□□□ -0.85
NPAS4-201ENST00000311034 MAP6D1Q9H9H5 199 aa9.74□□□□□ -0.85
NPAS4-201ENST00000311034 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
NPAS4-201ENST00000311034 DNAL4O96015 105 aa9.74□□□□□ -0.85
NPAS4-201ENST00000311034 FAM218AQ96MZ4 157 aa9.74□□□□□ -0.85
NPAS4-201ENST00000311034 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
NPAS4-201ENST00000311034 CRPP02741 224 aa9.72□□□□□ -0.85
NPAS4-201ENST00000311034 SMR3AQ99954 134 aa9.72□□□□□ -0.85
NPAS4-201ENST00000311034 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
NPAS4-201ENST00000311034 TMEM89A2RUT3 159 aa9.72□□□□□ -0.85
NPAS4-201ENST00000311034 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
NPAS4-201ENST00000311034 TIRAPP58753 221 aa9.71□□□□□ -0.85
NPAS4-201ENST00000311034 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.85
NPAS4-201ENST00000311034 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.85
NPAS4-201ENST00000311034 IGKV3D-7A0A0C4DH55 119 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 TIMM17BO60830 172 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 BBC3Q96PG8 261 aaPredicted RBP9.71□□□□□ -0.86
NPAS4-201ENST00000311034 VWFP04275 2813 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 FAM240AA0A1B0GVK7 77 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 CCL24O00175 119 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 MIR7-3HGQ8N6C7 128 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 ZNF702PQ9H963 129 aa9.71□□□□□ -0.86
NPAS4-201ENST00000311034 STAB1Q9NY15 2570 aa9.7□□□□□ -0.86
NPAS4-201ENST00000311034 BAHCC1Q9P281 2608 aa9.7□□□□□ -0.86
NPAS4-201ENST00000311034 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
NPAS4-201ENST00000311034 PF4P02776 101 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
NPAS4-201ENST00000311034 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
NPAS4-201ENST00000311034 SDIM1Q6ZPB5 146 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 C11orf72Q8NBR9 251 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 COPS9Q8WXC6 57 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
NPAS4-201ENST00000311034 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
NPAS4-201ENST00000311034 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 NTM-AS1Q6ZSK4 140 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 ACYP1P07311 99 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 LINC00482Q8N8I6 264 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 PRORYQ9H606 182 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 K7EQD1 137 aa9.67□□□□□ -0.86
NPAS4-201ENST00000311034 IGHV4-31P0DP07 118 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 MALP21145 153 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 HIST1H4AP62805 103 aaKnown RBP9.66□□□□□ -0.86
NPAS4-201ENST00000311034 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
NPAS4-201ENST00000311034 ZNF469Q96JG9 3925 aaPredicted RBP9.65□□□□□ -0.86
NPAS4-201ENST00000311034 A0A087WYN8 130 aa9.65□□□□□ -0.86
NPAS4-201ENST00000311034 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
NPAS4-201ENST00000311034 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
NPAS4-201ENST00000311034 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 LECT2O14960 151 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 TRACP01848 142 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 CDC42SE2Q9NRR3 84 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 C9orf129Q5T035 196 aaKnown RBP9.64□□□□□ -0.87
NPAS4-201ENST00000311034 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
NPAS4-201ENST00000311034 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 NCR3O14931 201 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 A0A087WVE0 104 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 Q6YL49 198 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 C1orf158Q8N1D5 194 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
NPAS4-201ENST00000311034 FBN1P35555 2871 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms