RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 GNB1LQ9BYB4 327 aa13.24□□□□□ -0.29
MRPL39-201ENST00000307301 CYSLTR1Q9Y271 337 aa13.24□□□□□ -0.29
MRPL39-201ENST00000307301 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
MRPL39-201ENST00000307301 A0A087WYN8 130 aa13.23□□□□□ -0.29
MRPL39-201ENST00000307301 SYCNQ0VAF6 134 aa13.23□□□□□ -0.29
MRPL39-201ENST00000307301 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
MRPL39-201ENST00000307301 IGKV2-24A0A0C4DH68 120 aa13.22□□□□□ -0.29
MRPL39-201ENST00000307301 K7EMI3 77 aa13.22□□□□□ -0.29
MRPL39-201ENST00000307301 FLG2Q5D862 2391 aaPredicted RBP13.21□□□□□ -0.29
MRPL39-201ENST00000307301 A0A096LNI7 61 aa13.21□□□□□ -0.29
MRPL39-201ENST00000307301 IGHV3OR16-9A0A0B4J2B5 98 aa13.21□□□□□ -0.29
MRPL39-201ENST00000307301 APOMO95445 188 aa13.21□□□□□ -0.29
MRPL39-201ENST00000307301 RPL37AP61513 92 aaKnown RBP13.2□□□□□ -0.3
MRPL39-201ENST00000307301 MAJINQ3KP22 176 aa13.2□□□□□ -0.3
MRPL39-201ENST00000307301 COX19Q49B96 90 aa13.2□□□□□ -0.3
MRPL39-201ENST00000307301 APOC3P02656 99 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 ZC2HC1BQ5TFG8 222 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 Q6ZRU5 148 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 CAMK2N2Q96S95 79 aa13.19□□□□□ -0.3
MRPL39-201ENST00000307301 ALKBH7Q9BT30 221 aaPredicted RBP13.19□□□□□ -0.3
MRPL39-201ENST00000307301 LINC00242Q5T6M2 205 aa13.18□□□□□ -0.3
MRPL39-201ENST00000307301 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
MRPL39-201ENST00000307301 MRPL18Q9H0U6 180 aaKnown RBP13.18□□□□□ -0.3
MRPL39-201ENST00000307301 PLAC8Q9NZF1 115 aa13.18□□□□□ -0.3
MRPL39-201ENST00000307301 TGIF2-C20orf24A0A0A6YYL0 155 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 IGIPA6NJ69 53 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 MT-ND6P03923 174 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 Q6ZN92 141 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 ORAOV1Q8WV07 137 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 PKIGQ9Y2B9 76 aa13.17□□□□□ -0.3
MRPL39-201ENST00000307301 UBE2D1P51668 147 aa13.16□□□□□ -0.3
MRPL39-201ENST00000307301 FABP9Q0Z7S8 132 aa13.16□□□□□ -0.3
MRPL39-201ENST00000307301 AMELXQ99217 191 aa13.16□□□□□ -0.3
MRPL39-201ENST00000307301 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
MRPL39-201ENST00000307301 NPSP0C0P6 89 aa13.15□□□□□ -0.3
MRPL39-201ENST00000307301 STPG4Q8N801 248 aa13.15□□□□□ -0.3
MRPL39-201ENST00000307301 TOMM6Q96B49 74 aa13.15□□□□□ -0.3
MRPL39-201ENST00000307301 VCX2Q9H322 139 aa13.15□□□□□ -0.3
MRPL39-201ENST00000307301 SNAPINO95295 136 aa13.14□□□□□ -0.31
MRPL39-201ENST00000307301 G0S2P27469 103 aa13.14□□□□□ -0.31
MRPL39-201ENST00000307301 NDUFA5Q16718 116 aa13.14□□□□□ -0.31
MRPL39-201ENST00000307301 SVBPQ8N300 66 aa13.14□□□□□ -0.31
MRPL39-201ENST00000307301 A0A087WZ39 114 aa13.13□□□□□ -0.31
MRPL39-201ENST00000307301 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
MRPL39-201ENST00000307301 LCE2BO14633 110 aa13.13□□□□□ -0.31
MRPL39-201ENST00000307301 LINC00474Q9P2X8 69 aa13.13□□□□□ -0.31
MRPL39-201ENST00000307301 MYCBP2O75592 4640 aa13.12□□□□□ -0.31
MRPL39-201ENST00000307301 LINC01546A6NGU7 62 aa13.12□□□□□ -0.31
MRPL39-201ENST00000307301 TIMM17AQ99595 171 aa13.12□□□□□ -0.31
MRPL39-201ENST00000307301 A0A0J9YXV3 536 aa13.11□□□□□ -0.31
MRPL39-201ENST00000307301 PTTG1IPP53801 180 aa13.11□□□□□ -0.31
MRPL39-201ENST00000307301 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
MRPL39-201ENST00000307301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.1□□□□□ -0.31
MRPL39-201ENST00000307301 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
MRPL39-201ENST00000307301 PAPPA-AS1Q5QFB9 102 aa13.1□□□□□ -0.31
MRPL39-201ENST00000307301 F8WDY8 70 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 FA2HQ7L5A8 372 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 ERASQ7Z444 233 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 SCGB3A1Q96QR1 104 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
MRPL39-201ENST00000307301 NDUFA1O15239 70 aa13.08□□□□□ -0.32
MRPL39-201ENST00000307301 C10orf25Q5T742 122 aa13.08□□□□□ -0.32
MRPL39-201ENST00000307301 FAM19A3Q7Z5A8 133 aa13.08□□□□□ -0.32
MRPL39-201ENST00000307301 C7orf33Q8WU49 177 aa13.08□□□□□ -0.32
MRPL39-201ENST00000307301 MRPL35Q9NZE8 188 aaKnown RBP13.08□□□□□ -0.32
MRPL39-201ENST00000307301 DMBT1Q9UGM3 2413 aaPredicted RBP13.07□□□□□ -0.32
MRPL39-201ENST00000307301 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
MRPL39-201ENST00000307301 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
MRPL39-201ENST00000307301 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
MRPL39-201ENST00000307301 SMCO4Q9NRQ5 59 aa13.07□□□□□ -0.32
MRPL39-201ENST00000307301 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
MRPL39-201ENST00000307301 KRTAP29-1A8MX34 341 aaPredicted RBP13.05□□□□□ -0.32
MRPL39-201ENST00000307301 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
MRPL39-201ENST00000307301 J3QL48 77 aa13.04□□□□□ -0.32
MRPL39-201ENST00000307301 C18orf32Q8TCD1 76 aa13.04□□□□□ -0.32
MRPL39-201ENST00000307301 C6orf48Q9UBA6 75 aa13.04□□□□□ -0.32
MRPL39-201ENST00000307301 HERVK_113P63121 156 aa13.03□□□□□ -0.32
MRPL39-201ENST00000307301 SEC11AP67812 179 aa13.03□□□□□ -0.32
MRPL39-201ENST00000307301 C2orf82Q6UX34 121 aa13.03□□□□□ -0.32
MRPL39-201ENST00000307301 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
MRPL39-201ENST00000307301 URB1-AS1Q96HZ7 61 aa13.02□□□□□ -0.33
MRPL39-201ENST00000307301 YPEL4Q96NS1 127 aa13.02□□□□□ -0.33
MRPL39-201ENST00000307301 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
MRPL39-201ENST00000307301 A0A1W2PNN7 141 aa13.01□□□□□ -0.33
MRPL39-201ENST00000307301 PKHD1L1Q86WI1 4243 aa13.01□□□□□ -0.33
MRPL39-201ENST00000307301 TOMM7Q9P0U1 55 aa13□□□□□ -0.33
MRPL39-201ENST00000307301 A0A096LNJ9 63 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 PRSS2P07478 247 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 LINC00614P0C842 121 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 TLX1NBP0CAT3 122 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
MRPL39-201ENST00000307301 C9orf116Q5BN46 136 aaPredicted RBP12.99□□□□□ -0.33
MRPL39-201ENST00000307301 Q6ZRP5 223 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 CST9LQ9H4G1 147 aa12.99□□□□□ -0.33
MRPL39-201ENST00000307301 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms