RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.26
CSPG4P2Y-201ENST00000306853 URB1-AS1Q96HZ7 61 aa7.15□□□□□ -1.26
CSPG4P2Y-201ENST00000306853 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 HERVK_113P63121 156 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PMCHL1Q16048 86 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 ZC2HC1BQ5TFG8 222 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 OR10D4PQ8NGN7 298 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 IGHV3OR16-9A0A0B4J2B5 98 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 HSBP1O75506 76 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 ATP5LO75964 103 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 S100A1P23297 94 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 NDUFA6P56556 154 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 A0A087WZ39 114 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 A0A096LNJ9 63 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PMVKQ15126 192 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 FAM19A3Q7Z5A8 133 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PACRGQ96M98 296 aaPredicted RBP7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 COX6A2Q02221 97 aa7.11□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 LINC00526Q96FQ7 95 aa7.11□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 A0A0J9YXV3 536 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 TINCRA0A1B0GVN0 87 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 SLPIP03973 132 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PRSS2P07478 247 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 HAMPP81172 84 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 Q6ZSA8 131 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 LINC00469Q8N7U9 141 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 FAM30AQ9NZY2 134 aa7.1□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 DNAH5Q8TE73 4624 aa7.09□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 F8WDY8 70 aa7.09□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 NDUFA1O15239 70 aa7.09□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 SERF1AO75920 110 aa7.09□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 XGP55808 180 aa7.09□□□□□ -1.27
CSPG4P2Y-201ENST00000306853 H3BRM9 83 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 Q6ZRU5 148 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 TOMM7Q9P0U1 55 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 DYNC1H1Q14204 4646 aaKnown RBP7.07□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 LEPROTL1O95214 131 aa7.07□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 IGLV5-45A0A087WSX0 123 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 LOC107984640A0A0U1RRK4 108 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 IGLC3P0DOY3 106 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CKS1BP61024 79 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 Q8IZM0 81 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HSPB8Q9UJY1 196 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 LRP1BQ9NZR2 4599 aa7.06□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 RNF151Q2KHN1 245 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 Q8N1X5 172 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CHTOPQ9Y3Y2 248 aaKnown RBP7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 H0Y8G0 127 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CXCL5P42830 114 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 LINC00310P59036 64 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 CIRBP-AS1Q8TBR5 109 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 A0A096LNI7 61 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms