RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 C2orf16Q68DN1 1984 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 Q8IZM0 81 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 XGP55808 180 aa7.62□□□□□ -1.19
CLIP1-201ENST00000302528 NCOA6Q14686 2063 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-201ENST00000302528 MSMPQ1L6U9 139 aa7.61□□□□□ -1.19
CLIP1-201ENST00000302528 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
CLIP1-201ENST00000302528 U3KQK5 164 aa7.61□□□□□ -1.19
CLIP1-201ENST00000302528 MRGPRG-AS1Q2M3A8 158 aa7.61□□□□□ -1.19
CLIP1-201ENST00000302528 C10orf99Q6UWK7 81 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 H0Y9P7 68 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 PCNX3Q9H6A9 2034 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 CRYGAP11844 174 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 CRIP1P50238 77 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
CLIP1-201ENST00000302528 C19orf84I3L1E1 186 aa7.59□□□□□ -1.19
CLIP1-201ENST00000302528 NRACQ8N912 160 aa7.59□□□□□ -1.19
CLIP1-201ENST00000302528 A0A087WVE0 104 aa7.59□□□□□ -1.19
CLIP1-201ENST00000302528 CRIP3Q6Q6R5 217 aa7.59□□□□□ -1.19
CLIP1-201ENST00000302528 Q6ZS46 218 aa7.59□□□□□ -1.19
CLIP1-201ENST00000302528 LY6G6DO95868 133 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 EGFEM1PQ0D2K5 195 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 UNQ6190/PRO20217Q6UXQ8 127 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 PRRC2AP48634 2157 aaKnown RBP7.58□□□□□ -1.2
CLIP1-201ENST00000302528 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 Q8N814 137 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 Q9BRP9 147 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 P0C879 139 aa7.58□□□□□ -1.2
CLIP1-201ENST00000302528 MUC22E2RYF6 1773 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-201ENST00000302528 TMEM131Q92545 1883 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
CLIP1-201ENST00000302528 SERTAD4-AS1Q5TG53 156 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 DOPEY1Q5JWR5 2465 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 PLA2G5P39877 138 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 Q8N3U1 123 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
CLIP1-201ENST00000302528 SONP18583 2426 aaKnown RBP7.57□□□□□ -1.2
CLIP1-201ENST00000302528 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 A0A087WSZ3 146 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 Q8NA96 180 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 LINC00574Q9H8X3 128 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 PSMG3-AS1Q96PY0 264 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 NOTCH2Q04721 2471 aa7.56□□□□□ -1.2
CLIP1-201ENST00000302528 PRLHP81277 87 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 LINC01006Q8NI28 216 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 PCDH15Q96QU1 1955 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 Q6ZPA2 131 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 HCG22E2RYF7 251 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 PRM2P04554 102 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 C9orf116Q5BN46 136 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-201ENST00000302528 ZNF702PQ9H963 129 aa7.55□□□□□ -1.2
CLIP1-201ENST00000302528 C2orf91Q6ZV80 131 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 YPEL4Q96NS1 127 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 POLR2KP53803 58 aaKnown RBP7.54□□□□□ -1.2
CLIP1-201ENST00000302528 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
CLIP1-201ENST00000302528 LIMD2Q9BT23 127 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 CRIP2P52943 208 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-201ENST00000302528 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 PRR9Q5T870 116 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 BRWD1-AS2P59051 145 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 C18orf65Q6ZTR6 163 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 WISP2O76076 250 aa7.53□□□□□ -1.2
CLIP1-201ENST00000302528 A0A087WYN8 130 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 KLLNB2CW77 178 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 ADAMTS9Q9P2N4 1935 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 hDV103S1A0JD37 113 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-201ENST00000302528 A0A1B0GU69 56 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
CLIP1-201ENST00000302528 PRORYQ9H606 182 aa7.52□□□□□ -1.21
CLIP1-201ENST00000302528 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 ZNF295-AS1Q8N0V1 137 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
CLIP1-201ENST00000302528 FREM1Q5H8C1 2179 aa7.5□□□□□ -1.21
CLIP1-201ENST00000302528 ARHGAP21Q5T5U3 1957 aa7.5□□□□□ -1.21
CLIP1-201ENST00000302528 NUP210LQ5VU65 1888 aa7.5□□□□□ -1.21
CLIP1-201ENST00000302528 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
CLIP1-201ENST00000302528 SPG11Q96JI7 2443 aa7.49□□□□□ -1.21
CLIP1-201ENST00000302528 A0A1W2PNU3 283 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-201ENST00000302528 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
CLIP1-201ENST00000302528 FSTL3O95633 263 aa7.49□□□□□ -1.21
CLIP1-201ENST00000302528 COX6A2Q02221 97 aa7.48□□□□□ -1.21
CLIP1-201ENST00000302528 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
CLIP1-201ENST00000302528 PRR14LQ5THK1 2151 aa7.48□□□□□ -1.21
CLIP1-201ENST00000302528 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
CLIP1-201ENST00000302528 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
CLIP1-201ENST00000302528 Q9UF83 564 aa7.47□□□□□ -1.21
CLIP1-201ENST00000302528 IGIPA6NJ69 53 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms