RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 COX7B2Q8TF08 81 aa9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 RIF1Q5UIP0 2472 aaKnown RBP9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 AKAP6Q13023 2319 aa9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 INSP01308 110 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 RPL36AP83881 106 aaKnown RBP9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 SS18Q15532 418 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 RPL36ALQ969Q0 106 aaKnown RBP9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 AVPP01185 164 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 CCL18P55774 89 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 SERP1Q9Y6X1 66 aa9.55□□□□□ -0.88
RPUSD4-201ENST00000298317 K7EQD1 137 aa9.54□□□□□ -0.88
RPUSD4-201ENST00000298317 IGHV4-59P01825 116 aa9.54□□□□□ -0.88
RPUSD4-201ENST00000298317 MSMBP08118 114 aa9.54□□□□□ -0.88
RPUSD4-201ENST00000298317 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
RPUSD4-201ENST00000298317 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
RPUSD4-201ENST00000298317 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
RPUSD4-201ENST00000298317 MAP6D1Q9H9H5 199 aa9.53□□□□□ -0.88
RPUSD4-201ENST00000298317 CCKP06307 115 aa9.53□□□□□ -0.88
RPUSD4-201ENST00000298317 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
RPUSD4-201ENST00000298317 LINC00158P58513 81 aa9.52□□□□□ -0.88
RPUSD4-201ENST00000298317 C1orf195Q5TG92 126 aa9.52□□□□□ -0.88
RPUSD4-201ENST00000298317 COL12A1Q99715 3063 aa9.52□□□□□ -0.89
RPUSD4-201ENST00000298317 LY6G6DO95868 133 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 SLPIP03973 132 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 ORMDL1Q9P0S3 153 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 TRGV1A0A0A0MS02 117 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 IBA57-AS1B1ANH7 110 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 C19orf84I3L1E1 186 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 SLURP1P55000 103 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 S100A7L2Q5SY68 101 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
RPUSD4-201ENST00000298317 IGHV4-30-2A0A087WSY4 118 aa9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 HILS1P60008 231 aa9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 ZFHX2Q9C0A1 2572 aaPredicted RBP9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■■□□ 15.6
RPUSD4-201ENST00000298317 UBE2L6O14933 153 aa9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
RPUSD4-201ENST00000298317 GHRHP01286 108 aa9.49□□□□□ -0.89
RPUSD4-201ENST00000298317 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
RPUSD4-201ENST00000298317 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
RPUSD4-201ENST00000298317 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
RPUSD4-201ENST00000298317 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
RPUSD4-201ENST00000298317 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
RPUSD4-201ENST00000298317 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 PAX4O43316 350 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 C1orf158Q8N1D5 194 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 HIVEP3Q5T1R4 2406 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 IGHV3OR16-9A0A0B4J2B5 98 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 Q6ZTI0 123 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 XCL2Q9UBD3 114 aa9.47□□□□□ -0.89
RPUSD4-201ENST00000298317 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
RPUSD4-201ENST00000298317 CCL19Q99731 98 aa9.46□□□□□ -0.9
RPUSD4-201ENST00000298317 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
RPUSD4-201ENST00000298317 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 B4DSR2 109 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 XCL1P47992 114 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 CRYBG3Q68DQ2 2970 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 WFDC9Q8NEX5 89 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 ATRXP46100 2492 aa9.45□□□□□ -0.9
RPUSD4-201ENST00000298317 A0A087WZ39 114 aa9.44□□□□□ -0.9
RPUSD4-201ENST00000298317 H7BZZ5 65 aa9.44□□□□□ -0.9
RPUSD4-201ENST00000298317 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
RPUSD4-201ENST00000298317 CREBBPQ92793 2442 aa9.44□□□□□ -0.9
RPUSD4-201ENST00000298317 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
RPUSD4-201ENST00000298317 NBL1P41271 181 aa9.43□□□□□ -0.9
RPUSD4-201ENST00000298317 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
RPUSD4-201ENST00000298317 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
RPUSD4-201ENST00000298317 DYNLRB2Q8TF09 96 aa9.43□□□□□ -0.9
RPUSD4-201ENST00000298317 IGLV4-60A0A075B6I1 120 aa9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 Q8N814 137 aa9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 TMEM256-PLSCR3K7ERE1 68 aa9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 ODF3L2Q3SX64 289 aa9.42□□□□□ -0.9
RPUSD4-201ENST00000298317 A0A096LNT2 108 aa9.41□□□□□ -0.9
RPUSD4-201ENST00000298317 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
RPUSD4-201ENST00000298317 CSPG4Q6UVK1 2322 aa9.4□□□□□ -0.9
RPUSD4-201ENST00000298317 UBL5Q9BZL1 73 aa9.4□□□□□ -0.91
RPUSD4-201ENST00000298317 STHQ8IWL8 128 aa9.39□□□□□ -0.91
RPUSD4-201ENST00000298317 BCE1O60756 84 aa9.39□□□□□ -0.91
RPUSD4-201ENST00000298317 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
RPUSD4-201ENST00000298317 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
RPUSD4-201ENST00000298317 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
RPUSD4-201ENST00000298317 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
RPUSD4-201ENST00000298317 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
RPUSD4-201ENST00000298317 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
RPUSD4-201ENST00000298317 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
RPUSD4-201ENST00000298317 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
RPUSD4-201ENST00000298317 Q6YL49 198 aa9.36□□□□□ -0.91
RPUSD4-201ENST00000298317 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
RPUSD4-201ENST00000298317 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
RPUSD4-201ENST00000298317 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms