RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RAI1Q7Z5J4 1906 aaPredicted RBP5□□□□□ -1.61
GAPVD1-202ENST00000297933 ZNF73O43830 326 aaPredicted RBP5□□□□□ -1.61
GAPVD1-202ENST00000297933 CDC42SE2Q9NRR3 84 aa5□□□□□ -1.61
GAPVD1-202ENST00000297933 MUC7Q8TAX7 377 aa5□□□□□ -1.61
GAPVD1-202ENST00000297933 PCNX3Q9H6A9 2034 aa5□□□□□ -1.61
GAPVD1-202ENST00000297933 ANKHD1Q8IWZ3 2542 aaKnown RBP4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 EGFEM1PQ0D2K5 195 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 Q6ZQY7 126 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 FHL2Q14192 279 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 TIMM17BO60830 172 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 ZNF580Q9UK33 172 aa4.99□□□□□ -1.61
GAPVD1-202ENST00000297933 NRACQ8N912 160 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 PIEZO1Q92508 2521 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 FAM236DA0A1B0GTK5 79 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 FAM236CP0DP71 79 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 LINC00643Q86TS7 51 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 C3orf22Q8N5N4 141 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 UNQ6190/PRO20217Q6UXQ8 127 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 WFDC13Q8IUB5 93 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 MDFIQ99750 246 aa4.98□□□□□ -1.61
GAPVD1-202ENST00000297933 LYPD5Q6UWN5 251 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 TAX1BP3O14907 124 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 PTH2Q96A98 100 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 ENHOQ6UWT2 76 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 CACNA1AO00555 2505 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 ADAMTS20P59510 1910 aa4.97□□□□□ -1.61
GAPVD1-202ENST00000297933 TRIAP1O43715 76 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 RNASE8Q8TDE3 154 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 SPG11Q96JI7 2443 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 F8WDY8 70 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 ATP5EP2Q5VTU8 51 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 SDIM1Q6ZPB5 146 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 SMIM11BQ8TCY0 68 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 LST1O00453 97 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 COX6A2Q02221 97 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 Q6ZVQ6 151 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
GAPVD1-202ENST00000297933 HIVEP3Q5T1R4 2406 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 B5MCH6 92 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 MAPKAPK5-AS1Q8N8E1 139 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 KRTAP24-1Q3LI83 254 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 PRR14LQ5THK1 2151 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 IGLV4-60A0A075B6I1 120 aa4.95□□□□□ -1.62
GAPVD1-202ENST00000297933 NDUFC2O95298 119 aa4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 NDUFV3P56181 108 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 POM121L12Q8N7R1 296 aa4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 WNK1Q9H4A3 2382 aa4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 TANC2Q9HCD6 1990 aa4.94□□□□□ -1.62
GAPVD1-202ENST00000297933 MRPL55Q7Z7F7 128 aaKnown RBP4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 LINC00242Q5T6M2 205 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 SONP18583 2426 aaKnown RBP4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 DSCAML1Q8TD84 2053 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 Q8N2B8 174 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 Q8N9L7 120 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 NCOR2Q9Y618 2525 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 MRPS12O15235 138 aaKnown RBP4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 C2orf48Q96LS8 159 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 NDUFC2-KCTD14E9PQ53 114 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 ESRGQ1W209 222 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
GAPVD1-202ENST00000297933 Q9BRP9 147 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 CELA1Q9UNI1 258 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 LINC00694P0DN24 101 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 Q6JHZ5 121 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 RETNLBQ9BQ08 111 aa4.92□□□□□ -1.62
GAPVD1-202ENST00000297933 GAS8-AS1O95177 125 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 PRYO14603 147 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 XGP55808 180 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 EXPH5Q8NEV8 1989 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 SBSPONQ8IVN8 264 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
GAPVD1-202ENST00000297933 NAV2Q8IVL1 2488 aa4.9□□□□□ -1.62
GAPVD1-202ENST00000297933 A0A1B0GUV1 79 aa4.9□□□□□ -1.62
GAPVD1-202ENST00000297933 SMIM1B2RUZ4 78 aa4.9□□□□□ -1.62
GAPVD1-202ENST00000297933 NAV3Q8IVL0 2385 aa4.9□□□□□ -1.62
GAPVD1-202ENST00000297933 CNFNQ9BYD5 112 aa4.9□□□□□ -1.62
GAPVD1-202ENST00000297933 SORL1Q92673 2214 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 J3KT08 172 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 ARHGAP32A7KAX9 2087 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 FAM30AQ9NZY2 134 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 TP73-AS1Q9UF72 201 aa4.9□□□□□ -1.63
GAPVD1-202ENST00000297933 C16orf90A8MZG2 172 aa4.89□□□□□ -1.63
GAPVD1-202ENST00000297933 X6R8D5 127 aa4.89□□□□□ -1.63
GAPVD1-202ENST00000297933 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
GAPVD1-202ENST00000297933 Q6ZSN1 163 aa4.89□□□□□ -1.63
GAPVD1-202ENST00000297933 CSDC2Q9Y534 153 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms