RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 Q9UF83 564 aa11.85□□□□□ -0.51
SSRP1-202ENST00000293880 SPG11Q96JI7 2443 aa11.84□□□□□ -0.51
SSRP1-202ENST00000293880 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
SSRP1-202ENST00000293880 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
SSRP1-202ENST00000293880 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
SSRP1-202ENST00000293880 UBE2D3P61077 147 aa11.83□□□□□ -0.52
SSRP1-202ENST00000293880 TNCP24821 2201 aa11.83□□□□□ -0.52
SSRP1-202ENST00000293880 PRYO14603 147 aa11.83□□□□□ -0.52
SSRP1-202ENST00000293880 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
SSRP1-202ENST00000293880 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
SSRP1-202ENST00000293880 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
SSRP1-202ENST00000293880 KIAA1549Q9HCM3 1950 aa11.82□□□□□ -0.52
SSRP1-202ENST00000293880 Q6JHZ5 121 aa11.82□□□□□ -0.52
SSRP1-202ENST00000293880 M0R378 163 aa11.82□□□□□ -0.52
SSRP1-202ENST00000293880 ESRGQ1W209 222 aa11.82□□□□□ -0.52
SSRP1-202ENST00000293880 A0A087WYN8 130 aa11.81□□□□□ -0.52
SSRP1-202ENST00000293880 HIVEP2P31629 2446 aa11.81□□□□□ -0.52
SSRP1-202ENST00000293880 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
SSRP1-202ENST00000293880 TRBV6-4A0A1B0GX49 114 aa11.81□□□□□ -0.52
SSRP1-202ENST00000293880 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
SSRP1-202ENST00000293880 C4orf26Q17RF5 130 aa11.8□□□□□ -0.52
SSRP1-202ENST00000293880 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
SSRP1-202ENST00000293880 COX6A2Q02221 97 aa11.8□□□□□ -0.52
SSRP1-202ENST00000293880 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
SSRP1-202ENST00000293880 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
SSRP1-202ENST00000293880 LTBP2Q14767 1821 aa11.79□□□□□ -0.52
SSRP1-202ENST00000293880 EP400Q96L91 3159 aa11.79□□□□□ -0.52
SSRP1-202ENST00000293880 DEFB116Q30KQ4 102 aa11.79□□□□□ -0.52
SSRP1-202ENST00000293880 ZNF702PQ9H963 129 aa11.79□□□□□ -0.52
SSRP1-202ENST00000293880 TANC2Q9HCD6 1990 aa11.79□□□□□ -0.52
SSRP1-202ENST00000293880 KPRPQ5T749 579 aaPredicted RBP11.79□□□□□ -0.52
SSRP1-202ENST00000293880 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
SSRP1-202ENST00000293880 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
SSRP1-202ENST00000293880 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
SSRP1-202ENST00000293880 TRBV7-7A0A0K0K1E9 115 aa11.78□□□□□ -0.52
SSRP1-202ENST00000293880 DHRS4-AS1Q9P1J3 65 aa11.78□□□□□ -0.52
SSRP1-202ENST00000293880 LY6G6CO95867 125 aa11.77□□□□□ -0.53
SSRP1-202ENST00000293880 UBE2D2P62837 147 aa11.75□□□□□ -0.53
SSRP1-202ENST00000293880 PYGO1Q9Y3Y4 419 aa11.75□□□□□ -0.53
SSRP1-202ENST00000293880 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
SSRP1-202ENST00000293880 CSPG4Q6UVK1 2322 aa11.75□□□□□ -0.53
SSRP1-202ENST00000293880 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
SSRP1-202ENST00000293880 LY6G6DO95868 133 aa11.74□□□□□ -0.53
SSRP1-202ENST00000293880 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
SSRP1-202ENST00000293880 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 IGHV6-1A0A0B4J1U7 121 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 FBXL19-AS1Q494R0 122 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 C10orf25Q5T742 122 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 IL17DQ8TAD2 202 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 CACNA1AO00555 2505 aa11.73□□□□□ -0.53
SSRP1-202ENST00000293880 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
SSRP1-202ENST00000293880 NCOA6Q14686 2063 aaPredicted RBP11.73□□□□□ -0.53
SSRP1-202ENST00000293880 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
SSRP1-202ENST00000293880 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
SSRP1-202ENST00000293880 CYSRT1A8MQ03 144 aa11.72□□□□□ -0.53
SSRP1-202ENST00000293880 Q8N3U1 123 aa11.72□□□□□ -0.53
SSRP1-202ENST00000293880 ZNF706Q9Y5V0 76 aaPredicted RBP11.72□□□□□ -0.53
SSRP1-202ENST00000293880 SONP18583 2426 aaKnown RBP11.71□□□□□ -0.53
SSRP1-202ENST00000293880 NTM-AS1Q6ZSK4 140 aa11.7□□□□□ -0.54
SSRP1-202ENST00000293880 PRO0628Q9UI54 55 aa11.7□□□□□ -0.54
SSRP1-202ENST00000293880 VPREB1P12018 145 aa11.7□□□□□ -0.54
SSRP1-202ENST00000293880 LELP1Q5T871 98 aa11.7□□□□□ -0.54
SSRP1-202ENST00000293880 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
SSRP1-202ENST00000293880 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
SSRP1-202ENST00000293880 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
SSRP1-202ENST00000293880 Q8N814 137 aa11.69□□□□□ -0.54
SSRP1-202ENST00000293880 C6orf223Q8N319 242 aa11.69□□□□□ -0.54
SSRP1-202ENST00000293880 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
SSRP1-202ENST00000293880 NCOR2Q9Y618 2525 aa11.68□□□□□ -0.54
SSRP1-202ENST00000293880 TRBV10-3A0A0K0K1G6 114 aa11.67□□□□□ -0.54
SSRP1-202ENST00000293880 COX17Q14061 63 aa11.67□□□□□ -0.54
SSRP1-202ENST00000293880 ADAMTSL4-AS1Q5T5F5 129 aa11.67□□□□□ -0.54
SSRP1-202ENST00000293880 KLLNB2CW77 178 aa11.67□□□□□ -0.54
SSRP1-202ENST00000293880 POLR2KP53803 58 aaKnown RBP11.66□□□□□ -0.54
SSRP1-202ENST00000293880 LINC00310P59036 64 aa11.66□□□□□ -0.54
SSRP1-202ENST00000293880 H0Y9P7 68 aa11.66□□□□□ -0.54
SSRP1-202ENST00000293880 SMR3AQ99954 134 aa11.65□□□□□ -0.54
SSRP1-202ENST00000293880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
SSRP1-202ENST00000293880 IGIPA6NJ69 53 aa11.65□□□□□ -0.54
SSRP1-202ENST00000293880 PCDH15Q96QU1 1955 aa11.65□□□□□ -0.54
SSRP1-202ENST00000293880 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
SSRP1-202ENST00000293880 PSMG3-AS1Q96PY0 264 aa11.65□□□□□ -0.54
SSRP1-202ENST00000293880 ATRXP46100 2492 aa11.65□□□□□ -0.55
SSRP1-202ENST00000293880 Q8IZM0 81 aa11.64□□□□□ -0.55
SSRP1-202ENST00000293880 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
SSRP1-202ENST00000293880 A8MTW9 85 aa11.64□□□□□ -0.55
SSRP1-202ENST00000293880 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
SSRP1-202ENST00000293880 FREM1Q5H8C1 2179 aa11.64□□□□□ -0.55
SSRP1-202ENST00000293880 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 C1orf137Q5JT78 98 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 SPAG11AQ6PDA7 123 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 SPINT4Q6UDR6 99 aa11.63□□□□□ -0.55
SSRP1-202ENST00000293880 Q8N6K4 173 aa11.62□□□□□ -0.55
SSRP1-202ENST00000293880 BRI3O95415 125 aa11.62□□□□□ -0.55
SSRP1-202ENST00000293880 LINC00575Q6W349 94 aa11.62□□□□□ -0.55
SSRP1-202ENST00000293880 SBSPONQ8IVN8 264 aa11.62□□□□□ -0.55
SSRP1-202ENST00000293880 TMEM254Q8TBM7 123 aa11.61□□□□□ -0.55
SSRP1-202ENST00000293880 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms