RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
RAB28-201ENST00000288723 C2orf66Q6UXQ4 117 aa13.04□□□□□ -0.32
RAB28-201ENST00000288723 SPACA4Q8TDM5 124 aa13.03□□□□□ -0.32
RAB28-201ENST00000288723 GNB1LQ9BYB4 327 aa13.03□□□□□ -0.32
RAB28-201ENST00000288723 IGKV2-24A0A0C4DH68 120 aa13.02□□□□□ -0.32
RAB28-201ENST00000288723 KRTAP10-4P60372 401 aaPredicted RBP13.02□□□□□ -0.32
RAB28-201ENST00000288723 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.32
RAB28-201ENST00000288723 CARD19Q96LW7 228 aa13.02□□□□□ -0.32
RAB28-201ENST00000288723 NXT2Q9NPJ8 142 aaKnown RBP13.02□□□□□ -0.32
RAB28-201ENST00000288723 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.32
RAB28-201ENST00000288723 A0A087WYN8 130 aa13.02□□□□□ -0.33
RAB28-201ENST00000288723 SYCNQ0VAF6 134 aa13.02□□□□□ -0.33
RAB28-201ENST00000288723 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.33
RAB28-201ENST00000288723 APOC3P02656 99 aa13.01□□□□□ -0.33
RAB28-201ENST00000288723 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
RAB28-201ENST00000288723 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
RAB28-201ENST00000288723 SCO1O75880 301 aa13□□□□□ -0.33
RAB28-201ENST00000288723 MAJINQ3KP22 176 aa12.99□□□□□ -0.33
RAB28-201ENST00000288723 A0A096LNI7 61 aa12.99□□□□□ -0.33
RAB28-201ENST00000288723 K7EMI3 77 aa12.99□□□□□ -0.33
RAB28-201ENST00000288723 Q6ZRU5 148 aa12.99□□□□□ -0.33
RAB28-201ENST00000288723 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
RAB28-201ENST00000288723 APOMO95445 188 aa12.98□□□□□ -0.33
RAB28-201ENST00000288723 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
RAB28-201ENST00000288723 MRPL18Q9H0U6 180 aaKnown RBP12.98□□□□□ -0.33
RAB28-201ENST00000288723 TGIF2-C20orf24A0A0A6YYL0 155 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
RAB28-201ENST00000288723 FABP9Q0Z7S8 132 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 SPAG11BQ08648 103 aa12.97□□□□□ -0.33
RAB28-201ENST00000288723 COX19Q49B96 90 aa12.96□□□□□ -0.33
RAB28-201ENST00000288723 LINC00173Q6ZV60 143 aa12.96□□□□□ -0.33
RAB28-201ENST00000288723 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
RAB28-201ENST00000288723 VCX2Q9H322 139 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 UBE2D1P51668 147 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 Q6ZN92 141 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 STPG4Q8N801 248 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 AMELXQ99217 191 aa12.95□□□□□ -0.34
RAB28-201ENST00000288723 MT-ND6P03923 174 aa12.94□□□□□ -0.34
RAB28-201ENST00000288723 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
RAB28-201ENST00000288723 OR10D4PQ8NGN7 298 aa12.94□□□□□ -0.34
RAB28-201ENST00000288723 C2orf48Q96LS8 159 aa12.94□□□□□ -0.34
RAB28-201ENST00000288723 C2orf88Q9BSF0 95 aa12.94□□□□□ -0.34
RAB28-201ENST00000288723 SVBPQ8N300 66 aa12.93□□□□□ -0.34
RAB28-201ENST00000288723 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
RAB28-201ENST00000288723 A0A0J9YXV3 536 aa12.92□□□□□ -0.34
RAB28-201ENST00000288723 SNAPINO95295 136 aa12.92□□□□□ -0.34
RAB28-201ENST00000288723 HERC1Q15751 4861 aa12.92□□□□□ -0.34
RAB28-201ENST00000288723 A0A087WZ39 114 aa12.91□□□□□ -0.34
RAB28-201ENST00000288723 S100A12P80511 92 aa12.91□□□□□ -0.34
RAB28-201ENST00000288723 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
RAB28-201ENST00000288723 DMBT1Q9UGM3 2413 aaPredicted RBP12.91□□□□□ -0.34
RAB28-201ENST00000288723 G0S2P27469 103 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 LOC107984640A0A0U1RRK4 108 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 NPSP0C0P6 89 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
RAB28-201ENST00000288723 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
RAB28-201ENST00000288723 LINC01546A6NGU7 62 aa12.89□□□□□ -0.35
RAB28-201ENST00000288723 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
RAB28-201ENST00000288723 C10orf25Q5T742 122 aa12.89□□□□□ -0.35
RAB28-201ENST00000288723 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
RAB28-201ENST00000288723 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
RAB28-201ENST00000288723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
RAB28-201ENST00000288723 FA2HQ7L5A8 372 aa12.88□□□□□ -0.35
RAB28-201ENST00000288723 UNQ6190/PRO20217Q6UXQ8 127 aa12.88□□□□□ -0.35
RAB28-201ENST00000288723 ERASQ7Z444 233 aa12.88□□□□□ -0.35
RAB28-201ENST00000288723 KIAA0087Q14695 138 aa12.87□□□□□ -0.35
RAB28-201ENST00000288723 PAPPA-AS1Q5QFB9 102 aa12.87□□□□□ -0.35
RAB28-201ENST00000288723 NDUFA1O15239 70 aa12.86□□□□□ -0.35
RAB28-201ENST00000288723 RPL18AQ02543 176 aaKnown RBP12.86□□□□□ -0.35
RAB28-201ENST00000288723 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
RAB28-201ENST00000288723 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
RAB28-201ENST00000288723 MRPL35Q9NZE8 188 aaKnown RBP12.85□□□□□ -0.35
RAB28-201ENST00000288723 LRP1Q07954 4544 aaKnown RBP12.85□□□□□ -0.35
RAB28-201ENST00000288723 RNF151Q2KHN1 245 aa12.85□□□□□ -0.35
RAB28-201ENST00000288723 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
RAB28-201ENST00000288723 FAM19A3Q7Z5A8 133 aa12.84□□□□□ -0.35
RAB28-201ENST00000288723 C6orf48Q9UBA6 75 aa12.84□□□□□ -0.35
RAB28-201ENST00000288723 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.35
RAB28-201ENST00000288723 URB1-AS1Q96HZ7 61 aa12.83□□□□□ -0.35
RAB28-201ENST00000288723 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
RAB28-201ENST00000288723 F8WDY8 70 aa12.83□□□□□ -0.36
RAB28-201ENST00000288723 J3QL48 77 aa12.83□□□□□ -0.36
RAB28-201ENST00000288723 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
RAB28-201ENST00000288723 YPEL4Q96NS1 127 aa12.82□□□□□ -0.36
RAB28-201ENST00000288723 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
RAB28-201ENST00000288723 HERVK_113P63121 156 aa12.81□□□□□ -0.36
RAB28-201ENST00000288723 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
RAB28-201ENST00000288723 GEMIN7Q9H840 131 aaKnown RBP12.81□□□□□ -0.36
RAB28-201ENST00000288723 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
RAB28-201ENST00000288723 KRTAP29-1A8MX34 341 aaPredicted RBP12.81□□□□□ -0.36
RAB28-201ENST00000288723 LINC00614P0C842 121 aa12.8□□□□□ -0.36
RAB28-201ENST00000288723 SEC11AP67812 179 aa12.8□□□□□ -0.36
RAB28-201ENST00000288723 A0A096LNJ9 63 aa12.79□□□□□ -0.36
RAB28-201ENST00000288723 PMCHL1Q16048 86 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms