RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
ACER3-201ENST00000278544 CCL18P55774 89 aa9.05□□□□□ -0.96
ACER3-201ENST00000278544 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
ACER3-201ENST00000278544 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
ACER3-201ENST00000278544 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
ACER3-201ENST00000278544 CRPP02741 224 aa9.04□□□□□ -0.96
ACER3-201ENST00000278544 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
ACER3-201ENST00000278544 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
ACER3-201ENST00000278544 HERVK_113P61574 105 aa9.04□□□□□ -0.96
ACER3-201ENST00000278544 M0R2N4 97 aa9.04□□□□□ -0.96
ACER3-201ENST00000278544 COX8AP10176 69 aa9.04□□□□□ -0.96
ACER3-201ENST00000278544 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
ACER3-201ENST00000278544 LECT2O14960 151 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 LGALS3P17931 250 aaKnown RBP9.03□□□□□ -0.96
ACER3-201ENST00000278544 DAND5Q8N907 189 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 J3QQQ9 107 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 K7EP13 123 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 SS18Q15532 418 aa9.03□□□□□ -0.96
ACER3-201ENST00000278544 CSDC2Q9Y534 153 aaKnown RBP9.03□□□□□ -0.96
ACER3-201ENST00000278544 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.96
ACER3-201ENST00000278544 SH2D6Q7Z4S9 175 aa9.02□□□□□ -0.96
ACER3-201ENST00000278544 NFE4Q86UQ8 179 aa9.02□□□□□ -0.96
ACER3-201ENST00000278544 KLK5Q9Y337 293 aaPredicted RBP9.02□□□□□ -0.96
ACER3-201ENST00000278544 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
ACER3-201ENST00000278544 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 E9PLD3 99 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 SIVA1O15304 175 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 HERVK_113P63121 156 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 A0A1B0GUV1 79 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 EREGO14944 169 aa9.01□□□□□ -0.97
ACER3-201ENST00000278544 H7C423 109 aa9□□□□□ -0.97
ACER3-201ENST00000278544 MALP21145 153 aa9□□□□□ -0.97
ACER3-201ENST00000278544 C2orf82Q6UX34 121 aa9□□□□□ -0.97
ACER3-201ENST00000278544 C15orf53Q8NAA6 179 aa9□□□□□ -0.97
ACER3-201ENST00000278544 H3BNG1 76 aa9□□□□□ -0.97
ACER3-201ENST00000278544 Q9H8V8 135 aa9□□□□□ -0.97
ACER3-201ENST00000278544 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
ACER3-201ENST00000278544 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
ACER3-201ENST00000278544 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
ACER3-201ENST00000278544 H3BRM9 83 aa8.99□□□□□ -0.97
ACER3-201ENST00000278544 Q6ZVH6 145 aa8.99□□□□□ -0.97
ACER3-201ENST00000278544 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
ACER3-201ENST00000278544 GCSHP23434 173 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 PRSS2P07478 247 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
ACER3-201ENST00000278544 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
ACER3-201ENST00000278544 CASC10Q5T4H9 136 aa8.97□□□□□ -0.97
ACER3-201ENST00000278544 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
ACER3-201ENST00000278544 SNHG12Q9BXW3 62 aa8.97□□□□□ -0.97
ACER3-201ENST00000278544 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.97
ACER3-201ENST00000278544 TIRAPP58753 221 aa8.96□□□□□ -0.97
ACER3-201ENST00000278544 HIST1H4GQ99525 98 aa8.96□□□□□ -0.97
ACER3-201ENST00000278544 PFN2P35080 140 aa8.96□□□□□ -0.98
ACER3-201ENST00000278544 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
ACER3-201ENST00000278544 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.98
ACER3-201ENST00000278544 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
ACER3-201ENST00000278544 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
ACER3-201ENST00000278544 NAA38Q9BRA0 125 aaKnown RBP8.96□□□□□ -0.98
ACER3-201ENST00000278544 LEPROTO15243 131 aa8.95□□□□□ -0.98
ACER3-201ENST00000278544 SEC11AP67812 179 aa8.95□□□□□ -0.98
ACER3-201ENST00000278544 COX7A2LO14548 114 aa8.95□□□□□ -0.98
ACER3-201ENST00000278544 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
ACER3-201ENST00000278544 C1orf43Q9BWL3 253 aa8.95□□□□□ -0.98
ACER3-201ENST00000278544 MEIG1Q5JSS6 88 aa8.94□□□□□ -0.98
ACER3-201ENST00000278544 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
ACER3-201ENST00000278544 RAB37Q96AX2 223 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 KMT2AQ03164 3969 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 PTTG1IPP53801 180 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 COX7B2Q8TF08 81 aa8.93□□□□□ -0.98
ACER3-201ENST00000278544 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
ACER3-201ENST00000278544 LY6G6CO95867 125 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 FOXI1Q12951 378 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 ADAMTSL4-AS1Q5T5F5 129 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 A0A087WZ39 114 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 K7ERJ3 54 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
ACER3-201ENST00000278544 NPSP0C0P6 89 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 SFTA2Q6UW10 78 aa8.92□□□□□ -0.98
ACER3-201ENST00000278544 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 FXYD2P54710 66 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 PRR34Q9NV39 138 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 M0R143 59 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
ACER3-201ENST00000278544 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
ACER3-201ENST00000278544 CKS1BP61024 79 aa8.9□□□□□ -0.98
ACER3-201ENST00000278544 C10orf25Q5T742 122 aa8.9□□□□□ -0.98
ACER3-201ENST00000278544 DNAH10OSP0CZ25 163 aa8.9□□□□□ -0.99
ACER3-201ENST00000278544 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
ACER3-201ENST00000278544 APOMO95445 188 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms