RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TRAV9-1A0A075B6T8 112 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 NCR2O95944 276 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 NTF3P20783 257 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
LRTM1-201ENST00000273286 ATP5L2Q7Z4Y8 100 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 NUP35Q8NFH5 326 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
LRTM1-201ENST00000273286 AMMECR1LQ6DCA0 310 aa6.09□□□□□ -1.43
LRTM1-201ENST00000273286 ZNF25P17030 456 aaPredicted RBP6.08□□□□□ -1.44
LRTM1-201ENST00000273286 HBBP68871 147 aa6.08□□□□□ -1.44
LRTM1-201ENST00000273286 C15orf56Q8N910 161 aa6.08□□□□□ -1.44
LRTM1-201ENST00000273286 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
LRTM1-201ENST00000273286 PHOX2AO14813 284 aa6.08□□□□□ -1.44
LRTM1-201ENST00000273286 CHTF8P0CG12 524 aa6.08□□□□□ -1.44
LRTM1-201ENST00000273286 COX6A2Q02221 97 aa6.08□□□□□ -1.44
LRTM1-201ENST00000273286 APCSP02743 223 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 S100A1P23297 94 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 CAMPP49913 170 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 COX19Q49B96 90 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
LRTM1-201ENST00000273286 CHCHD10Q8WYQ3 142 aaPredicted RBP6.07□□□□□ -1.44
LRTM1-201ENST00000273286 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 TMEM191AQ9H0A3 160 aa6.07□□□□□ -1.44
LRTM1-201ENST00000273286 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
LRTM1-201ENST00000273286 MAJINQ3KP22 176 aa6.06□□□□□ -1.44
LRTM1-201ENST00000273286 REG3GQ6UW15 175 aa6.06□□□□□ -1.44
LRTM1-201ENST00000273286 STPG4Q8N801 248 aa6.06□□□□□ -1.44
LRTM1-201ENST00000273286 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
LRTM1-201ENST00000273286 SMCO4Q9NRQ5 59 aa6.06□□□□□ -1.44
LRTM1-201ENST00000273286 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 PPP1R17O96001 155 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 FGF6P10767 208 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 RNASEKQ6P5S7 137 aaKnown RBP6.05□□□□□ -1.44
LRTM1-201ENST00000273286 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 GATD1Q8NB37 220 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 OR5A1Q8NGJ0 315 aa6.05□□□□□ -1.44
LRTM1-201ENST00000273286 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
LRTM1-201ENST00000273286 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
LRTM1-201ENST00000273286 MT-ND6P03923 174 aa6.04□□□□□ -1.44
LRTM1-201ENST00000273286 HIGD2BQ4VC39 106 aa6.04□□□□□ -1.44
LRTM1-201ENST00000273286 MRAP2Q96G30 205 aa6.04□□□□□ -1.44
LRTM1-201ENST00000273286 IGHV1-58A0A0C4DH39 117 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 A0A0J9YXV3 536 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 I3L3M4 83 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 ATP6V1G1O75348 118 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 PPBPP02775 128 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 FAM104BQ5XKR9 115 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 PAM16Q9Y3D7 125 aa6.03□□□□□ -1.44
LRTM1-201ENST00000273286 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
LRTM1-201ENST00000273286 A0A096LNI7 61 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 IGKV2-29A2NJV5 120 aaPredicted RBP6.02□□□□□ -1.45
LRTM1-201ENST00000273286 CCL25O15444 150 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 RAB4AP20338 218 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 PMCHP20382 165 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 SS18Q15532 418 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 Q6ZRP5 223 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 SMIM29Q86T20 159 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 AMN1Q8IY45 258 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 CARD19Q96LW7 228 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 GNB1LQ9BYB4 327 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
LRTM1-201ENST00000273286 LINC00959A0A1B0GUT2 108 aa6.01□□□□□ -1.45
LRTM1-201ENST00000273286 CKS2P33552 79 aa6.01□□□□□ -1.45
LRTM1-201ENST00000273286 XCL1P47992 114 aa6.01□□□□□ -1.45
LRTM1-201ENST00000273286 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
LRTM1-201ENST00000273286 RPL39LQ96EH5 51 aaKnown RBP6.01□□□□□ -1.45
LRTM1-201ENST00000273286 TNXBP22105 4242 aa6.01□□□□□ -1.45
LRTM1-201ENST00000273286 SYCNQ0VAF6 134 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 CD164L2Q6UWJ8 174 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 CBLN2Q8IUK8 224 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 ORMDL3Q8N138 153 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 ST20Q9HBF5 79 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 LAMTOR2Q9Y2Q5 125 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 LRP2P98164 4655 aa6□□□□□ -1.45
LRTM1-201ENST00000273286 TGIF2-C20orf24A0A0A6YYL0 155 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 ESDP10768 282 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 MRPL51Q4U2R6 128 aaKnown RBP5.99□□□□□ -1.45
LRTM1-201ENST00000273286 TMEM136Q6ZRR5 245 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 CDC42SE2Q9NRR3 84 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 TRBV27A0A0K0K1C4 114 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 LOC107984640A0A0U1RRK4 108 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 C1orf196B1AJZ1 125 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 D6R8Y8 96 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 ZNF664Q8N3J9 261 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
LRTM1-201ENST00000273286 CSDC2Q9Y534 153 aaKnown RBP5.99□□□□□ -1.45
LRTM1-201ENST00000273286 TCAPO15273 167 aa5.98□□□□□ -1.45
LRTM1-201ENST00000273286 SRSF9Q13242 221 aaKnown RBP eCLIP5.98□□□□□ -1.45
LRTM1-201ENST00000273286 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
LRTM1-201ENST00000273286 PRELID3AQ96N28 172 aa5.98□□□□□ -1.45
LRTM1-201ENST00000273286 YPEL4Q96NS1 127 aa5.98□□□□□ -1.45
LRTM1-201ENST00000273286 TRAPPC1Q9Y5R8 145 aa5.98□□□□□ -1.45
LRTM1-201ENST00000273286 IGLV4-69A0A075B6H9 119 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms