RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 V9GYV3 84 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
TPM3-201ENST00000271850 COX7A2LO14548 114 aa5.42□□□□□ -1.54
TPM3-201ENST00000271850 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
TPM3-201ENST00000271850 CAMK2N2Q96S95 79 aa5.42□□□□□ -1.54
TPM3-201ENST00000271850 C1orf196B1AJZ1 125 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 SRP19P09132 144 aaKnown RBP5.41□□□□□ -1.54
TPM3-201ENST00000271850 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 CEBPGP53567 150 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 SUMO2P61956 95 aaKnown RBP5.41□□□□□ -1.54
TPM3-201ENST00000271850 RPL39P62891 51 aaKnown RBP5.41□□□□□ -1.54
TPM3-201ENST00000271850 RPL18AQ02543 176 aaKnown RBP5.41□□□□□ -1.54
TPM3-201ENST00000271850 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
TPM3-201ENST00000271850 PRR26Q8N8Z3 221 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 C2orf48Q96LS8 159 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
TPM3-201ENST00000271850 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 C9JQL5 133 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 VCYO14598 125 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 ISOC2Q96AB3 205 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 FAM210AQ96ND0 272 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 SMIM7Q9BQ49 75 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 PKIGQ9Y2B9 76 aa5.4□□□□□ -1.54
TPM3-201ENST00000271850 MT-ND6P03923 174 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 MALP21145 153 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 FAM104BQ5XKR9 115 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 MRPL35Q9NZE8 188 aaKnown RBP5.39□□□□□ -1.55
TPM3-201ENST00000271850 C6orf48Q9UBA6 75 aa5.39□□□□□ -1.55
TPM3-201ENST00000271850 FCER1GP30273 86 aa5.38□□□□□ -1.55
TPM3-201ENST00000271850 RPL23P62829 140 aaKnown RBP5.38□□□□□ -1.55
TPM3-201ENST00000271850 BLOC1S1P78537 153 aa5.38□□□□□ -1.55
TPM3-201ENST00000271850 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
TPM3-201ENST00000271850 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
TPM3-201ENST00000271850 TRBV24-1A0A075B6N3 115 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 ZNF727A8MUV8 499 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 H0Y9J4 135 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 TLX1NBP0CAT3 122 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 RPL32P62910 135 aaKnown RBP5.37□□□□□ -1.55
TPM3-201ENST00000271850 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 ORAOV1Q8WV07 137 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 BORCS7Q96B45 105 aa5.37□□□□□ -1.55
TPM3-201ENST00000271850 A0A1B0GXF2 115 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 NPYP01303 97 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 RIGQ13278 110 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
TPM3-201ENST00000271850 FAM19A5Q7Z5A7 132 aaPredicted RBP5.36□□□□□ -1.55
TPM3-201ENST00000271850 KIR2DL4Q99706 377 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
TPM3-201ENST00000271850 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
TPM3-201ENST00000271850 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 D6R8Y8 96 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 PPP1R2P9O14990 202 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 TCAPO15273 167 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 TNFRSF6BO95407 300 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
TPM3-201ENST00000271850 C20orf78Q9BR46 151 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
TPM3-201ENST00000271850 A0A087WZ39 114 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 NDUFA1O15239 70 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 PPP1R17O96001 155 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 GAGE2EQ4V326 116 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 LINC00242Q5T6M2 205 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 C2orf82Q6UX34 121 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 AKAP14Q86UN6 197 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 DIRC1Q969H9 104 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 GAGE2DQ9UEU5 116 aa5.34□□□□□ -1.55
TPM3-201ENST00000271850 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 LINC00862A6NCI5 91 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 CKS2P33552 79 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 MRPL54Q6P161 138 aaKnown RBP5.33□□□□□ -1.56
TPM3-201ENST00000271850 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
TPM3-201ENST00000271850 IGLV1-50A0A075B6I6 118 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 F8WDY8 70 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 M0QXV9 152 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 HBBP68871 147 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 ADIRFQ15847 76 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 TMEM241Q24JQ0 296 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 TMEM18Q96B42 140 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 IMMP2LQ96T52 175 aa5.32□□□□□ -1.56
TPM3-201ENST00000271850 UBE2D1P51668 147 aa5.31□□□□□ -1.56
TPM3-201ENST00000271850 SMAGPQ0VAQ4 97 aa5.31□□□□□ -1.56
TPM3-201ENST00000271850 NAT8Q9UHE5 227 aa5.31□□□□□ -1.56
TPM3-201ENST00000271850 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
TPM3-201ENST00000271850 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
TPM3-201ENST00000271850 A0A087X002 238 aa5.29□□□□□ -1.56
TPM3-201ENST00000271850 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms