RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 C11orf72Q8NBR9 251 aa16.9■□□□□ 0.3
CCM2L-201ENST00000262659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCM2L-201ENST00000262659 SMIM26A0A096LP01 95 aa16.89■□□□□ 0.29
CCM2L-201ENST00000262659 TTC28Q96AY4 2481 aa16.89■□□□□ 0.29
CCM2L-201ENST00000262659 IGLV1-40P01703 118 aa16.89■□□□□ 0.29
CCM2L-201ENST00000262659 SNURFQ9Y675 71 aa16.89■□□□□ 0.29
CCM2L-201ENST00000262659 TOMM7Q9P0U1 55 aa16.88■□□□□ 0.29
CCM2L-201ENST00000262659 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
CCM2L-201ENST00000262659 TRAV7A0A075B6U4 112 aa16.87■□□□□ 0.29
CCM2L-201ENST00000262659 CDC42SE2Q9NRR3 84 aa16.87■□□□□ 0.29
CCM2L-201ENST00000262659 COX7B2Q8TF08 81 aa16.86■□□□□ 0.29
CCM2L-201ENST00000262659 RMI2Q96E14 147 aa16.86■□□□□ 0.29
CCM2L-201ENST00000262659 LINC00474Q9P2X8 69 aa16.86■□□□□ 0.29
CCM2L-201ENST00000262659 TRBV10-3A0A0K0K1G6 114 aa16.86■□□□□ 0.29
CCM2L-201ENST00000262659 CFHR3Q02985 330 aa16.86■□□□□ 0.29
CCM2L-201ENST00000262659 PAX4O43316 350 aa16.85■□□□□ 0.29
CCM2L-201ENST00000262659 KLKP1Q107X0 134 aa16.85■□□□□ 0.29
CCM2L-201ENST00000262659 CDSNQ15517 529 aa16.85■□□□□ 0.29
CCM2L-201ENST00000262659 UBL5Q9BZL1 73 aa16.85■□□□□ 0.29
CCM2L-201ENST00000262659 JMJD7-PLA2G4BH0Y9G9 81 aa16.84■□□□□ 0.29
CCM2L-201ENST00000262659 LMO4P61968 165 aa16.84■□□□□ 0.29
CCM2L-201ENST00000262659 NTM-AS1Q6ZSK4 140 aa16.84■□□□□ 0.29
CCM2L-201ENST00000262659 ZNF292O60281 2723 aa16.83■□□□□ 0.28
CCM2L-201ENST00000262659 F8WEM9 126 aa16.83■□□□□ 0.28
CCM2L-201ENST00000262659 Q6ZTI0 123 aa16.83■□□□□ 0.28
CCM2L-201ENST00000262659 CREBBPQ92793 2442 aa16.82■□□□□ 0.28
CCM2L-201ENST00000262659 A0A0U1RQV1 116 aa16.8■□□□□ 0.28
CCM2L-201ENST00000262659 H3BUX3 64 aa16.8■□□□□ 0.28
CCM2L-201ENST00000262659 BRK1Q8WUW1 75 aa16.8■□□□□ 0.28
CCM2L-201ENST00000262659 TLN1Q9Y490 2541 aaKnown RBP16.8■□□□□ 0.28
CCM2L-201ENST00000262659 TRAV10A0A0B4J240 114 aa16.8■□□□□ 0.28
CCM2L-201ENST00000262659 BPESC1Q9GZL8 116 aa16.8■□□□□ 0.28
CCM2L-201ENST00000262659 NBASA2RRP1 2371 aa16.79■□□□□ 0.28
CCM2L-201ENST00000262659 NBL1P41271 181 aa16.78■□□□□ 0.28
CCM2L-201ENST00000262659 TRBV7-6A0A0J9YX20 115 aa16.77■□□□□ 0.28
CCM2L-201ENST00000262659 CCL21O00585 134 aa16.77■□□□□ 0.28
CCM2L-201ENST00000262659 LINC00167Q96N53 147 aa16.77■□□□□ 0.28
CCM2L-201ENST00000262659 RIF1Q5UIP0 2472 aaKnown RBP16.77■□□□□ 0.28
CCM2L-201ENST00000262659 RBM3P98179 157 aaKnown RBP16.77■□□□□ 0.28
CCM2L-201ENST00000262659 C2CD3Q4AC94 2353 aa16.77■□□□□ 0.27
CCM2L-201ENST00000262659 C10orf99Q6UWK7 81 aa16.76■□□□□ 0.27
CCM2L-201ENST00000262659 VPS13CQ709C8 3753 aa16.76■□□□□ 0.27
CCM2L-201ENST00000262659 TRBV6-4A0A1B0GX49 114 aa16.76■□□□□ 0.27
CCM2L-201ENST00000262659 FBXL19-AS1Q494R0 122 aa16.76■□□□□ 0.27
CCM2L-201ENST00000262659 LY6G6DO95868 133 aa16.75■□□□□ 0.27
CCM2L-201ENST00000262659 RNASE1P07998 156 aaKnown RBP16.75■□□□□ 0.27
CCM2L-201ENST00000262659 Q8N814 137 aa16.75■□□□□ 0.27
CCM2L-201ENST00000262659 DEFB131AP59861 70 aa16.75■□□□□ 0.27
CCM2L-201ENST00000262659 SEC61GP60059 68 aa16.75■□□□□ 0.27
CCM2L-201ENST00000262659 A0A1W2PPR1 153 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 TMEM256-PLSCR3K7ERE1 68 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 BCE1O60756 84 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 ABCA2Q9BZC7 2435 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 A6NDX4 124 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 CRYBG3Q68DQ2 2970 aa16.74■□□□□ 0.27
CCM2L-201ENST00000262659 IGKV3OR2-268A0A0C4DH90 116 aa16.73■□□□□ 0.27
CCM2L-201ENST00000262659 IBA57-AS1B1ANH7 110 aa16.73■□□□□ 0.27
CCM2L-201ENST00000262659 C1orf195Q5TG92 126 aa16.73■□□□□ 0.27
CCM2L-201ENST00000262659 V9GYY9 64 aa16.72■□□□□ 0.27
CCM2L-201ENST00000262659 IGHV4-38-2P0DP08 117 aa16.72■□□□□ 0.27
CCM2L-201ENST00000262659 ZFHX2Q9C0A1 2572 aaPredicted RBP16.72■□□□□ 0.27
CCM2L-201ENST00000262659 K7EQD1 137 aa16.71■□□□□ 0.27
CCM2L-201ENST00000262659 LINC00482Q8N8I6 264 aa16.71■□□□□ 0.27
CCM2L-201ENST00000262659 A0A096LNT2 108 aa16.71■□□□□ 0.27
CCM2L-201ENST00000262659 LINC01547P58512 204 aaPredicted RBP16.7■□□□□ 0.26
CCM2L-201ENST00000262659 HAMPP81172 84 aa16.68■□□□□ 0.26
CCM2L-201ENST00000262659 UBE2L6O14933 153 aa16.68■□□□□ 0.26
CCM2L-201ENST00000262659 M0R2N4 97 aa16.67■□□□□ 0.26
CCM2L-201ENST00000262659 TMEM89A2RUT3 159 aa16.67■□□□□ 0.26
CCM2L-201ENST00000262659 NANOS2P60321 138 aaKnown RBP16.67■□□□□ 0.26
CCM2L-201ENST00000262659 C11orf68Q9H3H3 251 aaKnown RBP16.67■□□□□ 0.26
CCM2L-201ENST00000262659 PRR3P79522 188 aaKnown RBP16.66■□□□□ 0.26
CCM2L-201ENST00000262659 Q6ZQT0 140 aa16.65■□□□□ 0.26
CCM2L-201ENST00000262659 A8MTW9 85 aa16.64■□□□□ 0.25
CCM2L-201ENST00000262659 TRGV1A0A0A0MS02 117 aa16.64■□□□□ 0.25
CCM2L-201ENST00000262659 TM2D3Q9BRN9 247 aa16.64■□□□□ 0.25
CCM2L-201ENST00000262659 CSMD2Q7Z408 3487 aa16.63■□□□□ 0.25
CCM2L-201ENST00000262659 FAM229BQ4G0N7 80 aa16.63■□□□□ 0.25
CCM2L-201ENST00000262659 IGHV3OR16-9A0A0B4J2B5 98 aa16.62■□□□□ 0.25
CCM2L-201ENST00000262659 Q6ZVQ6 151 aa16.62■□□□□ 0.25
CCM2L-201ENST00000262659 MPLKIPQ8TAP9 179 aa16.61■□□□□ 0.25
CCM2L-201ENST00000262659 NDUFC1O43677 76 aa16.6■□□□□ 0.25
CCM2L-201ENST00000262659 Q8N3U1 123 aa16.6■□□□□ 0.25
CCM2L-201ENST00000262659 TRBV10-1A0A0K0K1A3 114 aa16.59■□□□□ 0.25
CCM2L-201ENST00000262659 ADORA2A-AS1P86434 159 aa16.59■□□□□ 0.25
CCM2L-201ENST00000262659 MAP1AP78559 2803 aaPredicted RBP16.58■□□□□ 0.25
CCM2L-201ENST00000262659 TRBV7-4A0A0J9YYF1 115 aa16.58■□□□□ 0.25
CCM2L-201ENST00000262659 MIFP14174 115 aa16.58■□□□□ 0.25
CCM2L-201ENST00000262659 IGLV4-60A0A075B6I1 120 aa16.57■□□□□ 0.24
CCM2L-201ENST00000262659 INSP01308 110 aa16.56■□□□□ 0.24
CCM2L-201ENST00000262659 A0A087WZ39 114 aa16.56■□□□□ 0.24
CCM2L-201ENST00000262659 ATP5EP56381 51 aaPredicted RBP16.56■□□□□ 0.24
CCM2L-201ENST00000262659 CUBNO60494 3623 aa16.55■□□□□ 0.24
CCM2L-201ENST00000262659 C6orf226Q5I0X4 101 aa16.55■□□□□ 0.24
CCM2L-201ENST00000262659 LOC110117498A0A087WWA1 95 aa16.54■□□□□ 0.24
CCM2L-201ENST00000262659 ZNF843Q8N446 348 aa16.53■□□□□ 0.24
CCM2L-201ENST00000262659 LAMTOR3Q9UHA4 124 aa16.53■□□□□ 0.24
CCM2L-201ENST00000262659 CEP295Q9C0D2 2601 aa16.52■□□□□ 0.24
CCM2L-201ENST00000262659 LOC100131303A0A0U1RQF7 123 aa16.52■□□□□ 0.23
CCM2L-201ENST00000262659 CXCL6P80162 114 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms