RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ANAPC1Q9H1A4 1944 aa7.86□□□□□ -1.15
SLC6A4-201ENST00000261707 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
SLC6A4-201ENST00000261707 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
SLC6A4-201ENST00000261707 LINC00846Q9NV44 126 aa7.86□□□□□ -1.15
SLC6A4-201ENST00000261707 Q8N6K4 173 aa7.85□□□□□ -1.15
SLC6A4-201ENST00000261707 Q8IZM0 81 aa7.84□□□□□ -1.15
SLC6A4-201ENST00000261707 NUP210Q8TEM1 1887 aaPredicted RBP7.84□□□□□ -1.15
SLC6A4-201ENST00000261707 RPL37AP8A6NKH3 93 aa7.84□□□□□ -1.15
SLC6A4-201ENST00000261707 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 A0A096LNJ9 63 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 CDC42SE2Q9NRR3 84 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 ALPK3Q96L96 1907 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 KLLNB2CW77 178 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 PCOTHQ58A44 107 aa7.83□□□□□ -1.16
SLC6A4-201ENST00000261707 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 LINC00242Q5T6M2 205 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 COX6A2Q02221 97 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 H0Y9P7 68 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 LINC01006Q8NI28 216 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 WNK2Q9Y3S1 2297 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 FBXL19-AS1Q494R0 122 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 MUC7Q8TAX7 377 aa7.82□□□□□ -1.16
SLC6A4-201ENST00000261707 KIAA1549Q9HCM3 1950 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 MED13Q9UHV7 2174 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 ADAMTS9Q9P2N4 1935 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 MALRD1Q5VYJ5 2156 aa7.81□□□□□ -1.16
SLC6A4-201ENST00000261707 TMEM131Q92545 1883 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 BBC3Q96PG8 261 aaPredicted RBP7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 ZNF580Q9UK33 172 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 PKDREJQ9NTG1 2253 aa7.8□□□□□ -1.16
SLC6A4-201ENST00000261707 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 CREBBPQ92793 2442 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 CXCL6P80162 114 aa7.79□□□□□ -1.16
SLC6A4-201ENST00000261707 CHCHD7Q9BUK0 85 aa7.78□□□□□ -1.16
SLC6A4-201ENST00000261707 CYSRT1A8MQ03 144 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 C16orf90A8MZG2 172 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 BRI3O95415 125 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 ROS1P08922 2347 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 PRM2P04554 102 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 REG3GQ6UW15 175 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 TANC2Q9HCD6 1990 aa7.77□□□□□ -1.17
SLC6A4-201ENST00000261707 LMO4P61968 165 aa7.76□□□□□ -1.17
SLC6A4-201ENST00000261707 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
SLC6A4-201ENST00000261707 AMELXQ99217 191 aa7.76□□□□□ -1.17
SLC6A4-201ENST00000261707 CNOT1A5YKK6 2376 aaKnown RBP7.76□□□□□ -1.17
SLC6A4-201ENST00000261707 C9orf116Q5BN46 136 aaPredicted RBP7.76□□□□□ -1.17
SLC6A4-201ENST00000261707 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
SLC6A4-201ENST00000261707 Q9UF83 564 aa7.75□□□□□ -1.17
SLC6A4-201ENST00000261707 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
SLC6A4-201ENST00000261707 KIAA1549LQ6ZVL6 1849 aa7.75□□□□□ -1.17
SLC6A4-201ENST00000261707 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
SLC6A4-201ENST00000261707 LELP1Q5T871 98 aa7.74□□□□□ -1.17
SLC6A4-201ENST00000261707 UNQ6190/PRO20217Q6UXQ8 127 aa7.74□□□□□ -1.17
SLC6A4-201ENST00000261707 WISP2O76076 250 aa7.74□□□□□ -1.17
SLC6A4-201ENST00000261707 NUP210LQ5VU65 1888 aa7.74□□□□□ -1.17
SLC6A4-201ENST00000261707 IGHV6-1A0A0B4J1U7 121 aa7.73□□□□□ -1.17
SLC6A4-201ENST00000261707 BCE1O60756 84 aa7.73□□□□□ -1.17
SLC6A4-201ENST00000261707 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
SLC6A4-201ENST00000261707 ZNF702PQ9H963 129 aa7.72□□□□□ -1.17
SLC6A4-201ENST00000261707 MRGPRG-AS1Q2M3A8 158 aa7.72□□□□□ -1.17
SLC6A4-201ENST00000261707 C10orf99Q6UWK7 81 aa7.71□□□□□ -1.17
SLC6A4-201ENST00000261707 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.17
SLC6A4-201ENST00000261707 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.17
SLC6A4-201ENST00000261707 FSTL3O95633 263 aa7.71□□□□□ -1.18
SLC6A4-201ENST00000261707 EDN2P20800 178 aa7.71□□□□□ -1.18
SLC6A4-201ENST00000261707 SPINK1P00995 79 aa7.7□□□□□ -1.18
SLC6A4-201ENST00000261707 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 A0A1W2PNU3 283 aaPredicted RBP7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 EGFEM1PQ0D2K5 195 aa7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 PCNX2A6NKB5 2137 aa7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 ATG2AQ2TAZ0 1938 aa7.69□□□□□ -1.18
SLC6A4-201ENST00000261707 LINC01546A6NGU7 62 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 NCOA6Q14686 2063 aaPredicted RBP7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 PLCE1Q9P212 2302 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 IGLV4-60A0A075B6I1 120 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 A0A087WSZ3 146 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 A0A1B0GU69 56 aa7.68□□□□□ -1.18
SLC6A4-201ENST00000261707 KIF26AQ9ULI4 1882 aaPredicted RBP7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 HCFC1P51610 2035 aa7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 SBSPONQ8IVN8 264 aa7.67□□□□□ -1.18
SLC6A4-201ENST00000261707 HIVEP2P31629 2446 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms