RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IGKCP01834 107 aa13.87□□□□□ -0.19
RTCA-201ENST00000260563 PLNP26678 52 aa13.87□□□□□ -0.19
RTCA-201ENST00000260563 ENHOQ6UWT2 76 aa13.87□□□□□ -0.19
RTCA-201ENST00000260563 SS18Q15532 418 aa13.86□□□□□ -0.19
RTCA-201ENST00000260563 LINC00242Q5T6M2 205 aa13.86□□□□□ -0.19
RTCA-201ENST00000260563 TINCRA0A1B0GVN0 87 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 CCL25O15444 150 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 SEC11AP67812 179 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 MIAQ16674 131 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 ATOH7Q8N100 152 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 RMI2Q96E14 147 aa13.85□□□□□ -0.19
RTCA-201ENST00000260563 RTL8CO15255 209 aa13.84□□□□□ -0.19
RTCA-201ENST00000260563 GEMIN7Q9H840 131 aaKnown RBP13.84□□□□□ -0.19
RTCA-201ENST00000260563 HERVK_113P63121 156 aa13.83□□□□□ -0.2
RTCA-201ENST00000260563 Q6ZRN7 208 aaPredicted RBP13.83□□□□□ -0.2
RTCA-201ENST00000260563 DNAH17Q9UFH2 4485 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 IGLV10-54A0A075B6I4 117 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 SMIM6P0DI80 62 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 COX6A2Q02221 97 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
RTCA-201ENST00000260563 PSCAO43653 123 aa13.81□□□□□ -0.2
RTCA-201ENST00000260563 CHCHD10Q8WYQ3 142 aaPredicted RBP13.81□□□□□ -0.2
RTCA-201ENST00000260563 TM2D2Q9BX73 214 aa13.81□□□□□ -0.2
RTCA-201ENST00000260563 ZNF22P17026 224 aaPredicted RBP13.8□□□□□ -0.2
RTCA-201ENST00000260563 XCL1P47992 114 aa13.8□□□□□ -0.2
RTCA-201ENST00000260563 COX11Q9Y6N1 276 aa13.8□□□□□ -0.2
RTCA-201ENST00000260563 IGLV5-45A0A087WSX0 123 aa13.8□□□□□ -0.2
RTCA-201ENST00000260563 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
RTCA-201ENST00000260563 CDPF1Q6NVV7 123 aa13.8□□□□□ -0.2
RTCA-201ENST00000260563 LINC00336Q6ZUF6 198 aa13.79□□□□□ -0.2
RTCA-201ENST00000260563 LINC00469Q8N7U9 141 aa13.79□□□□□ -0.2
RTCA-201ENST00000260563 CDKN2A-AS1Q9UH64 79 aa13.79□□□□□ -0.2
RTCA-201ENST00000260563 FAT2Q9NYQ8 4349 aa13.78□□□□□ -0.2
RTCA-201ENST00000260563 CD164L2Q6UWJ8 174 aa13.78□□□□□ -0.2
RTCA-201ENST00000260563 IGHV3OR16-9A0A0B4J2B5 98 aa13.77□□□□□ -0.21
RTCA-201ENST00000260563 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
RTCA-201ENST00000260563 MAJINQ3KP22 176 aa13.76□□□□□ -0.21
RTCA-201ENST00000260563 GAGE12HA6NDE8 117 aa13.75□□□□□ -0.21
RTCA-201ENST00000260563 H3BRM9 83 aa13.75□□□□□ -0.21
RTCA-201ENST00000260563 STPG4Q8N801 248 aa13.75□□□□□ -0.21
RTCA-201ENST00000260563 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 FOXI1Q12951 378 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 TNP2Q05952 138 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 C5orf38Q86SI9 138 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 VAMP8Q9BV40 100 aa13.74□□□□□ -0.21
RTCA-201ENST00000260563 HERVK_113P61574 105 aa13.73□□□□□ -0.21
RTCA-201ENST00000260563 KRTAP26-1Q6PEX3 210 aa13.73□□□□□ -0.21
RTCA-201ENST00000260563 A0A087WZ39 114 aa13.72□□□□□ -0.21
RTCA-201ENST00000260563 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
RTCA-201ENST00000260563 COX7A2LO14548 114 aa13.71□□□□□ -0.21
RTCA-201ENST00000260563 S100A12P80511 92 aa13.71□□□□□ -0.21
RTCA-201ENST00000260563 C12orf57Q99622 126 aa13.71□□□□□ -0.21
RTCA-201ENST00000260563 PAM16Q9Y3D7 125 aa13.71□□□□□ -0.21
RTCA-201ENST00000260563 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
RTCA-201ENST00000260563 SMIM1B2RUZ4 78 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 LINC01561Q8N1V8 128 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 MAPKAPK5-AS1Q8N8E1 139 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 IGHV3-64A0A075B6Q5 118 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 E9PLD3 99 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 MALP21145 153 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 SPATA45Q537H7 98 aa13.69□□□□□ -0.22
RTCA-201ENST00000260563 A0A087WTM6 91 aa13.68□□□□□ -0.22
RTCA-201ENST00000260563 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
RTCA-201ENST00000260563 EREGO14944 169 aa13.67□□□□□ -0.22
RTCA-201ENST00000260563 IGKV2D-26A0A0A0MRZ7 120 aa13.65□□□□□ -0.22
RTCA-201ENST00000260563 IGLV5-39A0A0G2JS06 123 aa13.65□□□□□ -0.22
RTCA-201ENST00000260563 LECT2O14960 151 aa13.65□□□□□ -0.22
RTCA-201ENST00000260563 PKD1P98161 4303 aa13.65□□□□□ -0.22
RTCA-201ENST00000260563 LEPROTO15243 131 aa13.64□□□□□ -0.23
RTCA-201ENST00000260563 APOMO95445 188 aa13.64□□□□□ -0.23
RTCA-201ENST00000260563 NMUP48645 174 aa13.64□□□□□ -0.23
RTCA-201ENST00000260563 DNAH11Q96DT5 4516 aa13.64□□□□□ -0.23
RTCA-201ENST00000260563 WFDC2Q14508 124 aa13.64□□□□□ -0.23
RTCA-201ENST00000260563 HECTD4Q9Y4D8 3996 aa13.63□□□□□ -0.23
RTCA-201ENST00000260563 PLEKHB2Q96CS7 222 aa13.63□□□□□ -0.23
RTCA-201ENST00000260563 USP17L23D6RBM5 183 aa13.62□□□□□ -0.23
RTCA-201ENST00000260563 ORAOV1Q8WV07 137 aa13.62□□□□□ -0.23
RTCA-201ENST00000260563 A0A1B0GVY2 172 aa13.61□□□□□ -0.23
RTCA-201ENST00000260563 J3QQQ9 107 aa13.61□□□□□ -0.23
RTCA-201ENST00000260563 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
RTCA-201ENST00000260563 Q8N814 137 aa13.61□□□□□ -0.23
RTCA-201ENST00000260563 LGALS3P17931 250 aaKnown RBP13.6□□□□□ -0.23
RTCA-201ENST00000260563 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
RTCA-201ENST00000260563 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
RTCA-201ENST00000260563 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
RTCA-201ENST00000260563 CFAP161Q6P656 301 aa13.59□□□□□ -0.23
RTCA-201ENST00000260563 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
RTCA-201ENST00000260563 PRSS2P07478 247 aa13.58□□□□□ -0.24
RTCA-201ENST00000260563 PCP2Q8IVA1 136 aa13.58□□□□□ -0.24
RTCA-201ENST00000260563 Q8IZM0 81 aa13.58□□□□□ -0.24
RTCA-201ENST00000260563 C14orf144Q96I85 54 aa13.58□□□□□ -0.24
RTCA-201ENST00000260563 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
RTCA-201ENST00000260563 COX8AP10176 69 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms