RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
SNRPA1-201ENST00000254193 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
SNRPA1-201ENST00000254193 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
SNRPA1-201ENST00000254193 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
SNRPA1-201ENST00000254193 INAFM2P0DMQ5 153 aa11.48□□□□□ -0.57
SNRPA1-201ENST00000254193 COX6A2Q02221 97 aa11.48□□□□□ -0.57
SNRPA1-201ENST00000254193 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
SNRPA1-201ENST00000254193 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
SNRPA1-201ENST00000254193 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
SNRPA1-201ENST00000254193 DPH3Q96FX2 82 aa11.47□□□□□ -0.57
SNRPA1-201ENST00000254193 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.57
SNRPA1-201ENST00000254193 SYCNQ0VAF6 134 aa11.46□□□□□ -0.57
SNRPA1-201ENST00000254193 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
SNRPA1-201ENST00000254193 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
SNRPA1-201ENST00000254193 APOMO95445 188 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 LINC00242Q5T6M2 205 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 Q6ZN92 141 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 TOMM6Q96B49 74 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 VCX2Q9H322 139 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 TRAPPC1Q9Y5R8 145 aa11.45□□□□□ -0.58
SNRPA1-201ENST00000254193 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-201ENST00000254193 G0S2P27469 103 aa11.44□□□□□ -0.58
SNRPA1-201ENST00000254193 UBE2D1P51668 147 aa11.44□□□□□ -0.58
SNRPA1-201ENST00000254193 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
SNRPA1-201ENST00000254193 AMELXQ99217 191 aa11.44□□□□□ -0.58
SNRPA1-201ENST00000254193 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 C2orf88Q9BSF0 95 aa11.43□□□□□ -0.58
SNRPA1-201ENST00000254193 A0A087WYN8 130 aa11.42□□□□□ -0.58
SNRPA1-201ENST00000254193 NPSP0C0P6 89 aa11.42□□□□□ -0.58
SNRPA1-201ENST00000254193 Q6ZRU5 148 aa11.42□□□□□ -0.58
SNRPA1-201ENST00000254193 FA2HQ7L5A8 372 aa11.42□□□□□ -0.58
SNRPA1-201ENST00000254193 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
SNRPA1-201ENST00000254193 A0A096LNI7 61 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 SCGB3A1Q96QR1 104 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
SNRPA1-201ENST00000254193 A0A087WZ39 114 aa11.4□□□□□ -0.58
SNRPA1-201ENST00000254193 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
SNRPA1-201ENST00000254193 ERASQ7Z444 233 aa11.4□□□□□ -0.58
SNRPA1-201ENST00000254193 SMCO4Q9NRQ5 59 aa11.4□□□□□ -0.58
SNRPA1-201ENST00000254193 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
SNRPA1-201ENST00000254193 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-201ENST00000254193 CBLN2Q8IUK8 224 aa11.38□□□□□ -0.59
SNRPA1-201ENST00000254193 C18orf32Q8TCD1 76 aa11.38□□□□□ -0.59
SNRPA1-201ENST00000254193 SRRM2Q9UQ35 2752 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-201ENST00000254193 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
SNRPA1-201ENST00000254193 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
SNRPA1-201ENST00000254193 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
SNRPA1-201ENST00000254193 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-201ENST00000254193 STPG4Q8N801 248 aa11.36□□□□□ -0.59
SNRPA1-201ENST00000254193 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
SNRPA1-201ENST00000254193 GAGE2BQ13066 116 aa11.35□□□□□ -0.59
SNRPA1-201ENST00000254193 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
SNRPA1-201ENST00000254193 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
SNRPA1-201ENST00000254193 FAM19A3Q7Z5A8 133 aa11.35□□□□□ -0.59
SNRPA1-201ENST00000254193 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 LINC01549A6NIU2 74 aa11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 LINC00614P0C842 121 aa11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 LINC00474Q9P2X8 69 aa11.34□□□□□ -0.59
SNRPA1-201ENST00000254193 A0A096LNJ9 63 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 NDUFA1O15239 70 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 HERVK_113P63121 156 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 LINC01561Q8N1V8 128 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 CST9LQ9H4G1 147 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 MRPL35Q9NZE8 188 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-201ENST00000254193 F8WDY8 70 aa11.32□□□□□ -0.6
SNRPA1-201ENST00000254193 SEC11AP67812 179 aa11.32□□□□□ -0.6
SNRPA1-201ENST00000254193 PMCHL1Q16048 86 aa11.32□□□□□ -0.6
SNRPA1-201ENST00000254193 RNF151Q2KHN1 245 aa11.32□□□□□ -0.6
SNRPA1-201ENST00000254193 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
SNRPA1-201ENST00000254193 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-201ENST00000254193 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
SNRPA1-201ENST00000254193 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
SNRPA1-201ENST00000254193 RAB5BP61020 215 aa11.3□□□□□ -0.6
SNRPA1-201ENST00000254193 PMVKQ15126 192 aa11.3□□□□□ -0.6
SNRPA1-201ENST00000254193 HBDP02042 147 aa11.29□□□□□ -0.6
SNRPA1-201ENST00000254193 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
SNRPA1-201ENST00000254193 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
SNRPA1-201ENST00000254193 TINCRA0A1B0GVN0 87 aa11.28□□□□□ -0.6
SNRPA1-201ENST00000254193 C7orf33Q8WU49 177 aa11.28□□□□□ -0.6
SNRPA1-201ENST00000254193 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-201ENST00000254193 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
SNRPA1-201ENST00000254193 PRSS2P07478 247 aa11.27□□□□□ -0.61
SNRPA1-201ENST00000254193 HNRNPA3P51991 378 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-201ENST00000254193 NDUFA6P56556 154 aa11.27□□□□□ -0.61
SNRPA1-201ENST00000254193 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 267.8 ms