RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
PCDHGA3-201ENST00000253812 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
PCDHGA3-201ENST00000253812 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
PCDHGA3-201ENST00000253812 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.84
PCDHGA3-201ENST00000253812 TSHBP01222 138 aa9.76□□□□□ -0.85
PCDHGA3-201ENST00000253812 CEP192Q8TEP8 1941 aa9.76□□□□□ -0.85
PCDHGA3-201ENST00000253812 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
PCDHGA3-201ENST00000253812 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
PCDHGA3-201ENST00000253812 RPL28P46779 137 aaKnown RBP9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 CRIP3Q6Q6R5 217 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 XAGE1AQ9HD64 81 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 CHD7Q9P2D1 2997 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 Q6ZTI0 123 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 IGF1P05019 195 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 LINC00208Q96KT6 92 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 FBXL19-AS1Q494R0 122 aa9.75□□□□□ -0.85
PCDHGA3-201ENST00000253812 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
PCDHGA3-201ENST00000253812 IGHV4-38-2P0DP08 117 aa9.74□□□□□ -0.85
PCDHGA3-201ENST00000253812 Q8N7P7 452 aa9.74□□□□□ -0.85
PCDHGA3-201ENST00000253812 RANBP2P49792 3224 aaKnown RBP9.74□□□□□ -0.85
PCDHGA3-201ENST00000253812 EPG5Q9HCE0 2579 aa9.73□□□□□ -0.85
PCDHGA3-201ENST00000253812 A0A096LNI7 61 aa9.73□□□□□ -0.85
PCDHGA3-201ENST00000253812 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
PCDHGA3-201ENST00000253812 GAS8-AS1O95177 125 aa9.73□□□□□ -0.85
PCDHGA3-201ENST00000253812 UNC80Q8N2C7 3258 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 DHRS4-AS1Q9P1J3 65 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 NCKAP5O14513 1909 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 K7EQG2 157 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 DAZAP2Q15038 168 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
PCDHGA3-201ENST00000253812 MTORP42345 2549 aa9.71□□□□□ -0.85
PCDHGA3-201ENST00000253812 UBE2D4Q9Y2X8 147 aa9.71□□□□□ -0.85
PCDHGA3-201ENST00000253812 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 MAP6D1Q9H9H5 199 aa9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 ALPK3Q96L96 1907 aa9.71□□□□□ -0.86
PCDHGA3-201ENST00000253812 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA3-201ENST00000253812 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
PCDHGA3-201ENST00000253812 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
PCDHGA3-201ENST00000253812 M0R378 163 aa9.7□□□□□ -0.86
PCDHGA3-201ENST00000253812 Q8N6K4 173 aa9.69□□□□□ -0.86
PCDHGA3-201ENST00000253812 C11orf21Q9P2W6 132 aa9.69□□□□□ -0.86
PCDHGA3-201ENST00000253812 CDH23Q9H251 3354 aa9.69□□□□□ -0.86
PCDHGA3-201ENST00000253812 Q8N814 137 aa9.69□□□□□ -0.86
PCDHGA3-201ENST00000253812 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
PCDHGA3-201ENST00000253812 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 COX17Q14061 63 aa9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 C1orf229Q6ZS94 237 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA3-201ENST00000253812 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 C19orf84I3L1E1 186 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 A0A096LNJ9 63 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 KIAA1549Q9HCM3 1950 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 DSCAMO60469 2012 aa9.67□□□□□ -0.86
PCDHGA3-201ENST00000253812 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 CRYGDP07320 174 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 PROK1P58294 105 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 DEFB135Q30KP9 77 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 BCE1O60756 84 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
PCDHGA3-201ENST00000253812 BEAN1Q3B7T3 259 aa9.65□□□□□ -0.86
PCDHGA3-201ENST00000253812 SETD2Q9BYW2 2564 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA3-201ENST00000253812 Q6ZSV7 163 aa9.65□□□□□ -0.87
PCDHGA3-201ENST00000253812 USP9YO00507 2555 aaPredicted RBP9.65□□□□□ -0.87
PCDHGA3-201ENST00000253812 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA3-201ENST00000253812 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
PCDHGA3-201ENST00000253812 Q8IZM0 81 aa9.64□□□□□ -0.87
PCDHGA3-201ENST00000253812 A0A087WYN8 130 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 DEFB4AO15263 64 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 C14orf177Q52M58 125 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 KLLNB2CW77 178 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 PRRC2AP48634 2157 aaKnown RBP9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 Q6ZVQ6 151 aa9.63□□□□□ -0.87
PCDHGA3-201ENST00000253812 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 hDV103S1A0JD37 113 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 TANC2Q9HCD6 1990 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 A6NDX4 124 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 HILS1P60008 231 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 FN1P02751 2386 aaKnown RBP9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 LMO4P61968 165 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
PCDHGA3-201ENST00000253812 PRR9Q5T870 116 aa9.61□□□□□ -0.87
PCDHGA3-201ENST00000253812 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms