RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 VAMP8Q9BV40 100 aa9.3□□□□□ -0.92
CNN1-201ENST00000252456 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
CNN1-201ENST00000252456 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 C20orf202A1L168 122 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 PRSS1P07477 247 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 CDC42SE2Q9NRR3 84 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 UBE2D4Q9Y2X8 147 aa9.28□□□□□ -0.92
CNN1-201ENST00000252456 LINC01620Q4KN68 170 aa9.27□□□□□ -0.92
CNN1-201ENST00000252456 KRTAP4-5Q9BYR2 181 aa9.27□□□□□ -0.92
CNN1-201ENST00000252456 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.92
CNN1-201ENST00000252456 FAT1Q14517 4588 aa9.27□□□□□ -0.92
CNN1-201ENST00000252456 DDTP30046 118 aa9.27□□□□□ -0.93
CNN1-201ENST00000252456 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
CNN1-201ENST00000252456 TMEM101Q96IK0 257 aa9.27□□□□□ -0.93
CNN1-201ENST00000252456 FAM30AQ9NZY2 134 aa9.27□□□□□ -0.93
CNN1-201ENST00000252456 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
CNN1-201ENST00000252456 TCAPO15273 167 aa9.26□□□□□ -0.93
CNN1-201ENST00000252456 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
CNN1-201ENST00000252456 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
CNN1-201ENST00000252456 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
CNN1-201ENST00000252456 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
CNN1-201ENST00000252456 FAM104AQ969W3 186 aa9.26□□□□□ -0.93
CNN1-201ENST00000252456 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 K7EMI3 77 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 Q6ZSA8 131 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
CNN1-201ENST00000252456 SPATA45Q537H7 98 aa9.24□□□□□ -0.93
CNN1-201ENST00000252456 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
CNN1-201ENST00000252456 PCLOQ9Y6V0 5065 aa9.24□□□□□ -0.93
CNN1-201ENST00000252456 ABCA13Q86UQ4 5058 aa9.24□□□□□ -0.93
CNN1-201ENST00000252456 H0Y8G0 127 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 HAMPP81172 84 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 FOXI1Q12951 378 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 ORMDL2Q53FV1 153 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
CNN1-201ENST00000252456 Q6ZUT4 128 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 Q8N1X5 172 aa9.23□□□□□ -0.93
CNN1-201ENST00000252456 CCL25O15444 150 aa9.22□□□□□ -0.93
CNN1-201ENST00000252456 SLPIP03973 132 aa9.22□□□□□ -0.93
CNN1-201ENST00000252456 XCL1P47992 114 aa9.22□□□□□ -0.93
CNN1-201ENST00000252456 MAJINQ3KP22 176 aa9.22□□□□□ -0.93
CNN1-201ENST00000252456 ATP5LO75964 103 aa9.21□□□□□ -0.93
CNN1-201ENST00000252456 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.93
CNN1-201ENST00000252456 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.93
CNN1-201ENST00000252456 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.93
CNN1-201ENST00000252456 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
CNN1-201ENST00000252456 MIEN1Q9BRT3 115 aa9.2□□□□□ -0.94
CNN1-201ENST00000252456 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
CNN1-201ENST00000252456 hDV102S1A0JD36 115 aa9.2□□□□□ -0.94
CNN1-201ENST00000252456 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
CNN1-201ENST00000252456 TOMM6Q96B49 74 aa9.2□□□□□ -0.94
CNN1-201ENST00000252456 IGLC3P0DOY3 106 aa9.19□□□□□ -0.94
CNN1-201ENST00000252456 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
CNN1-201ENST00000252456 SS18Q15532 418 aa9.19□□□□□ -0.94
CNN1-201ENST00000252456 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
CNN1-201ENST00000252456 GVQW2A0A096LPI5 108 aaPredicted RBP9.18□□□□□ -0.94
CNN1-201ENST00000252456 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
CNN1-201ENST00000252456 C14orf144Q96I85 54 aa9.18□□□□□ -0.94
CNN1-201ENST00000252456 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 ODF1Q14990 250 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 UQCR10Q9UDW1 63 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 VPS13BQ7Z7G8 4022 aa9.17□□□□□ -0.94
CNN1-201ENST00000252456 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
CNN1-201ENST00000252456 G0S2P27469 103 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 SCGB3A1Q96QR1 104 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
CNN1-201ENST00000252456 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.16□□□□□ -0.94
CNN1-201ENST00000252456 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
CNN1-201ENST00000252456 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
CNN1-201ENST00000252456 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.94
CNN1-201ENST00000252456 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
CNN1-201ENST00000252456 PANO1I0J062 215 aa9.14□□□□□ -0.95
CNN1-201ENST00000252456 Q6ZN92 141 aa9.14□□□□□ -0.95
CNN1-201ENST00000252456 ERASQ7Z444 233 aa9.14□□□□□ -0.95
CNN1-201ENST00000252456 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
CNN1-201ENST00000252456 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 COX7A2LO14548 114 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 Q5VSD8 79 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
CNN1-201ENST00000252456 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
CNN1-201ENST00000252456 EPM2AB3EWF7 344 aa9.12□□□□□ -0.95
CNN1-201ENST00000252456 DPM2O94777 84 aa9.12□□□□□ -0.95
CNN1-201ENST00000252456 IGKCP01834 107 aa9.12□□□□□ -0.95
CNN1-201ENST00000252456 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
CNN1-201ENST00000252456 ANKRD39Q53RE8 183 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms