RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MALP21145 153 aa7.4□□□□□ -1.22
SF3B6-201ENST00000233468 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
SF3B6-201ENST00000233468 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
SF3B6-201ENST00000233468 Q6ZUT4 128 aa7.4□□□□□ -1.22
SF3B6-201ENST00000233468 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
SF3B6-201ENST00000233468 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 COX7A2LO14548 114 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 CBLN2Q8IUK8 224 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 VCX2Q9H322 139 aa7.39□□□□□ -1.23
SF3B6-201ENST00000233468 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 APOMO95445 188 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 PRSS1P07477 247 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 LINC00614P0C842 121 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 FOXI1Q12951 378 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
SF3B6-201ENST00000233468 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
SF3B6-201ENST00000233468 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
SF3B6-201ENST00000233468 SEC11AP67812 179 aa7.37□□□□□ -1.23
SF3B6-201ENST00000233468 ERASQ7Z444 233 aa7.37□□□□□ -1.23
SF3B6-201ENST00000233468 C18orf32Q8TCD1 76 aa7.37□□□□□ -1.23
SF3B6-201ENST00000233468 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
SF3B6-201ENST00000233468 IGIPA6NJ69 53 aa7.36□□□□□ -1.23
SF3B6-201ENST00000233468 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
SF3B6-201ENST00000233468 LINC00310P59036 64 aa7.36□□□□□ -1.23
SF3B6-201ENST00000233468 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
SF3B6-201ENST00000233468 OPRPNQ99935 248 aaPredicted RBP7.36□□□□□ -1.23
SF3B6-201ENST00000233468 PKIGQ9Y2B9 76 aa7.36□□□□□ -1.23
SF3B6-201ENST00000233468 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
SF3B6-201ENST00000233468 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
SF3B6-201ENST00000233468 SRRM2Q9UQ35 2752 aaKnown RBP7.34□□□□□ -1.23
SF3B6-201ENST00000233468 KRTAP19-4Q3LI73 84 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
SF3B6-201ENST00000233468 AMELXQ99217 191 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
SF3B6-201ENST00000233468 FAT1Q14517 4588 aa7.34□□□□□ -1.23
SF3B6-201ENST00000233468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
SF3B6-201ENST00000233468 HBDP02042 147 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 XGP55808 180 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 BAGE3Q86Y29 109 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
SF3B6-201ENST00000233468 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 COLCA2A8K830 154 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 EPM2AB3EWF7 344 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 F8WDY8 70 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 TRGC2P03986 189 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 UBE2D1P51668 147 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 HERVK_113P63121 156 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
SF3B6-201ENST00000233468 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
SF3B6-201ENST00000233468 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
SF3B6-201ENST00000233468 ATP5LO75964 103 aa7.31□□□□□ -1.24
SF3B6-201ENST00000233468 LINC00242Q5T6M2 205 aa7.31□□□□□ -1.24
SF3B6-201ENST00000233468 DNAH8Q96JB1 4490 aa7.31□□□□□ -1.24
SF3B6-201ENST00000233468 A0A087WZ39 114 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 HSBP1O75506 76 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 S100A1P23297 94 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 PMVKQ15126 192 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 FAM19A3Q7Z5A8 133 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 C2orf48Q96LS8 159 aa7.3□□□□□ -1.24
SF3B6-201ENST00000233468 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 INAFM2P0DMQ5 153 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 SPAG11BQ08648 103 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 SYCNQ0VAF6 134 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 ORAOV1Q8WV07 137 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 CARD19Q96LW7 228 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
SF3B6-201ENST00000233468 CAMK2N2Q96S95 79 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 CST9LQ9H4G1 147 aa7.29□□□□□ -1.24
SF3B6-201ENST00000233468 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 TINCRA0A1B0GVN0 87 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 NDUFA6P56556 154 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 HAMPP81172 84 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 LINC01620Q4KN68 170 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 Q5VSD8 79 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 Q6ZSA8 131 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 URB1-AS1Q96HZ7 61 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
SF3B6-201ENST00000233468 H3BRM9 83 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
SF3B6-201ENST00000233468 SLPIP03973 132 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 PRSS2P07478 247 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 COX6A2Q02221 97 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 CHAC1Q9BUX1 264 aa7.27□□□□□ -1.25
SF3B6-201ENST00000233468 NDUFA1O15239 70 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms