RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 SAA4P35542 130 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 MIFP14174 115 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 CD164Q04900 197 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 ZFHX3Q15911 3703 aa9.27□□□□□ -0.93
MSH2-201ENST00000233146 PROK1P58294 105 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 IGHV3-38A0A0C4DH36 116 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 Q96MF0 132 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 RETNQ9HD89 108 aa9.26□□□□□ -0.93
MSH2-201ENST00000233146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.25□□□□□ -0.93
MSH2-201ENST00000233146 Q9UF83 564 aa9.25□□□□□ -0.93
MSH2-201ENST00000233146 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
MSH2-201ENST00000233146 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
MSH2-201ENST00000233146 EPG5Q9HCE0 2579 aa9.24□□□□□ -0.93
MSH2-201ENST00000233146 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
MSH2-201ENST00000233146 ESRGQ1W209 222 aa9.24□□□□□ -0.93
MSH2-201ENST00000233146 Q6ZTI0 123 aa9.24□□□□□ -0.93
MSH2-201ENST00000233146 LINC01547P58512 204 aaPredicted RBP9.23□□□□□ -0.93
MSH2-201ENST00000233146 NDUFA4O00483 81 aa9.23□□□□□ -0.93
MSH2-201ENST00000233146 TM2D3Q9BRN9 247 aa9.23□□□□□ -0.93
MSH2-201ENST00000233146 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
MSH2-201ENST00000233146 PAX4O43316 350 aa9.22□□□□□ -0.93
MSH2-201ENST00000233146 C19orf54Q5BKX5 351 aa9.21□□□□□ -0.93
MSH2-201ENST00000233146 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.93
MSH2-201ENST00000233146 TMEM256-PLSCR3K7ERE1 68 aa9.21□□□□□ -0.94
MSH2-201ENST00000233146 CCL18P55774 89 aa9.2□□□□□ -0.94
MSH2-201ENST00000233146 ADGRG4Q8IZF6 3080 aa9.2□□□□□ -0.94
MSH2-201ENST00000233146 Q6ZSN1 163 aa9.2□□□□□ -0.94
MSH2-201ENST00000233146 DEFB124Q8NES8 71 aa9.2□□□□□ -0.94
MSH2-201ENST00000233146 E7EQL1 145 aa9.2□□□□□ -0.94
MSH2-201ENST00000233146 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
MSH2-201ENST00000233146 CENPEQ02224 2701 aa9.19□□□□□ -0.94
MSH2-201ENST00000233146 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
MSH2-201ENST00000233146 MINOS1-NBL1R4GNA1 71 aa9.19□□□□□ -0.94
MSH2-201ENST00000233146 LY6G6DO95868 133 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 Q8N3U1 123 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 Q8NA96 180 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 MYO18BQ8IUG5 2567 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 Q6ZTC4 211 aa9.18□□□□□ -0.94
MSH2-201ENST00000233146 A0A087WZ39 114 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 CXCL6P80162 114 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 HAMPP81172 84 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 Q6ZQT0 140 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 Q8N814 137 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 Q6ZVQ6 151 aa9.17□□□□□ -0.94
MSH2-201ENST00000233146 K7EQG2 157 aa9.16□□□□□ -0.94
MSH2-201ENST00000233146 NREPQ16612 68 aa9.16□□□□□ -0.94
MSH2-201ENST00000233146 IGKV3-20P01619 116 aa9.15□□□□□ -0.94
MSH2-201ENST00000233146 SPG11Q96JI7 2443 aa9.15□□□□□ -0.94
MSH2-201ENST00000233146 LINC00158P58513 81 aa9.15□□□□□ -0.94
MSH2-201ENST00000233146 C6orf223Q8N319 242 aa9.15□□□□□ -0.94
MSH2-201ENST00000233146 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.95
MSH2-201ENST00000233146 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.95
MSH2-201ENST00000233146 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
MSH2-201ENST00000233146 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.952e-10■□□□□ 9.8
MSH2-201ENST00000233146 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 DAD1P61803 113 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 Q1T7F1 81 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 DYNLRB2Q8TF09 96 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 M0R2N4 97 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 A0A096LNT2 108 aa9.13□□□□□ -0.95
MSH2-201ENST00000233146 PRYO14603 147 aa9.12□□□□□ -0.95
MSH2-201ENST00000233146 DOPEY2Q9Y3R5 2298 aa9.12□□□□□ -0.95
MSH2-201ENST00000233146 FAM208BQ5VWN6 2430 aa9.11□□□□□ -0.95
MSH2-201ENST00000233146 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
MSH2-201ENST00000233146 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
MSH2-201ENST00000233146 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
MSH2-201ENST00000233146 LINC01560Q8TB33 94 aa9.1□□□□□ -0.95
MSH2-201ENST00000233146 C11orf68Q9H3H3 251 aaKnown RBP9.1□□□□□ -0.95
MSH2-201ENST00000233146 Q6ZRP5 223 aa9.1□□□□□ -0.95
MSH2-201ENST00000233146 C5orf56Q8N8D9 126 aa9.1□□□□□ -0.95
MSH2-201ENST00000233146 K7EQD1 137 aa9.1□□□□□ -0.95
MSH2-201ENST00000233146 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
MSH2-201ENST00000233146 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
MSH2-201ENST00000233146 NANOS2P60321 138 aaKnown RBP9.09□□□□□ -0.95
MSH2-201ENST00000233146 BPY2O14599 106 aa9.09□□□□□ -0.95
MSH2-201ENST00000233146 ZNF843Q8N446 348 aa9.08□□□□□ -0.96
MSH2-201ENST00000233146 DCHS2Q6V1P9 2916 aa9.08□□□□□ -0.96
MSH2-201ENST00000233146 RNASE1P07998 156 aaKnown RBP9.08□□□□□ -0.96
MSH2-201ENST00000233146 NTM-AS1Q6ZSK4 140 aa9.08□□□□□ -0.96
MSH2-201ENST00000233146 NOTCH2Q04721 2471 aa9.07□□□□□ -0.96
MSH2-201ENST00000233146 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
MSH2-201ENST00000233146 MRPL55Q7Z7F7 128 aaKnown RBP9.07□□□□□ -0.96
MSH2-201ENST00000233146 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
MSH2-201ENST00000233146 HTN1P15515 57 aa9.06□□□□□ -0.96
MSH2-201ENST00000233146 USMG5Q96IX5 58 aa9.05□□□□□ -0.96
MSH2-201ENST00000233146 K7EMT4 169 aa9.05□□□□□ -0.96
MSH2-201ENST00000233146 LY6HO94772 140 aa9.05□□□□□ -0.96
MSH2-201ENST00000233146 GNLYP22749 145 aa9.05□□□□□ -0.96
MSH2-201ENST00000233146 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
MSH2-201ENST00000233146 OCR1Q9BZK8 76 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms