RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
SF3A2-201ENST00000221494 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
SF3A2-201ENST00000221494 PROK1P58294 105 aa11.47□□□□□ -0.57
SF3A2-201ENST00000221494 HILS1P60008 231 aa11.47□□□□□ -0.57
SF3A2-201ENST00000221494 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
SF3A2-201ENST00000221494 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.58
SF3A2-201ENST00000221494 RNASE13Q5GAN3 156 aaKnown RBP11.46□□□□□ -0.58
SF3A2-201ENST00000221494 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.58
SF3A2-201ENST00000221494 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.58
SF3A2-201ENST00000221494 V9GYY9 64 aa11.46□□□□□ -0.58
SF3A2-201ENST00000221494 IGHV3-73A0A0B4J1V6 119 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 A8MZ25 164 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 HOXD3P31249 432 aaPredicted RBP11.45□□□□□ -0.58
SF3A2-201ENST00000221494 NPC2P61916 151 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 Q6ZSN1 163 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 Q9H8V8 135 aa11.45□□□□□ -0.58
SF3A2-201ENST00000221494 A0A1W2PRX2 142 aa11.44□□□□□ -0.58
SF3A2-201ENST00000221494 INAFM1C9JVW0 142 aa11.43□□□□□ -0.58
SF3A2-201ENST00000221494 LINC00242Q5T6M2 205 aa11.43□□□□□ -0.58
SF3A2-201ENST00000221494 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
SF3A2-201ENST00000221494 LINC01587Q99440 93 aa11.43□□□□□ -0.58
SF3A2-201ENST00000221494 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
SF3A2-201ENST00000221494 TRBV10-1A0A0K0K1A3 114 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 DEFB131AP59861 70 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
SF3A2-201ENST00000221494 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
SF3A2-201ENST00000221494 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
SF3A2-201ENST00000221494 INSP01308 110 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 RBMY1DP0C7P1 496 aaKnown RBP11.41□□□□□ -0.58
SF3A2-201ENST00000221494 C18orf65Q6ZTR6 163 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 CHCHD5Q9BSY4 110 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
SF3A2-201ENST00000221494 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 UQCRQO14949 82 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
SF3A2-201ENST00000221494 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
SF3A2-201ENST00000221494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.4□□□□□ -0.58
SF3A2-201ENST00000221494 PRO0628Q9UI54 55 aa11.4□□□□□ -0.58
SF3A2-201ENST00000221494 BAALC-AS2P0C853 105 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 RPL28P46779 137 aaKnown RBP11.39□□□□□ -0.59
SF3A2-201ENST00000221494 COX6A2Q02221 97 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
SF3A2-201ENST00000221494 DAZ4Q86SG3 579 aaKnown RBP11.39□□□□□ -0.59
SF3A2-201ENST00000221494 C3orf22Q8N5N4 141 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 DAZ3Q9NR90 486 aaKnown RBP11.39□□□□□ -0.59
SF3A2-201ENST00000221494 HIST2H2BDQ6DRA6 164 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
SF3A2-201ENST00000221494 HTN1P15515 57 aa11.38□□□□□ -0.59
SF3A2-201ENST00000221494 C6orf226Q5I0X4 101 aa11.38□□□□□ -0.59
SF3A2-201ENST00000221494 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
SF3A2-201ENST00000221494 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
SF3A2-201ENST00000221494 Q9UF83 564 aa11.38□□□□□ -0.59
SF3A2-201ENST00000221494 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 ZNF561-AS1K7EIQ3 104 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 MALP21145 153 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
SF3A2-201ENST00000221494 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 NDUFA7O95182 113 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 RPL36AP83881 106 aaKnown RBP11.37□□□□□ -0.59
SF3A2-201ENST00000221494 DEFB136Q30KP8 78 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 IL17DQ8TAD2 202 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 SMCR5Q8TEV8 140 aa11.37□□□□□ -0.59
SF3A2-201ENST00000221494 RPL36ALQ969Q0 106 aaKnown RBP11.37□□□□□ -0.59
SF3A2-201ENST00000221494 IGHV3-38A0A0C4DH36 116 aa11.36□□□□□ -0.59
SF3A2-201ENST00000221494 MAP6D1Q9H9H5 199 aa11.36□□□□□ -0.59
SF3A2-201ENST00000221494 SETXQ7Z333 2677 aaKnown RBP11.36□□□□□ -0.59
SF3A2-201ENST00000221494 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
SF3A2-201ENST00000221494 SETD2Q9BYW2 2564 aaPredicted RBP11.35□□□□□ -0.59
SF3A2-201ENST00000221494 KHDC1LQ5JSQ8 128 aa11.35□□□□□ -0.59
SF3A2-201ENST00000221494 HIST1H4AP62805 103 aaKnown RBP11.34□□□□□ -0.59
SF3A2-201ENST00000221494 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 C22orf24Q9Y442 160 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 CRPP02741 224 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 SLURP1P55000 103 aa11.34□□□□□ -0.59
SF3A2-201ENST00000221494 H0YGX0 51 aa11.33□□□□□ -0.6
SF3A2-201ENST00000221494 K7EQD1 137 aa11.33□□□□□ -0.6
SF3A2-201ENST00000221494 ATOX1O00244 68 aa11.32□□□□□ -0.6
SF3A2-201ENST00000221494 COX7CP15954 63 aa11.31□□□□□ -0.6
SF3A2-201ENST00000221494 OBSCN-AS1Q96MR7 158 aa11.3□□□□□ -0.6
SF3A2-201ENST00000221494 CYSRT1A8MQ03 144 aa11.3□□□□□ -0.6
SF3A2-201ENST00000221494 FAM218AQ96MZ4 157 aa11.3□□□□□ -0.6
SF3A2-201ENST00000221494 F8P00451 2351 aa11.29□□□□□ -0.6
SF3A2-201ENST00000221494 CRYGAP11844 174 aa11.29□□□□□ -0.6
SF3A2-201ENST00000221494 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
SF3A2-201ENST00000221494 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
SF3A2-201ENST00000221494 Q6JHZ5 121 aa11.28□□□□□ -0.6
SF3A2-201ENST00000221494 NTM-AS1Q6ZSK4 140 aa11.28□□□□□ -0.6
SF3A2-201ENST00000221494 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
SF3A2-201ENST00000221494 DNAL4O96015 105 aa11.28□□□□□ -0.6
SF3A2-201ENST00000221494 DEFB114Q30KQ6 69 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms