RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 MALP21145 153 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 HIST2H2BDQ6DRA6 164 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 C10orf105Q8TEF2 133 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
TUBB1-201ENST00000217133 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.29
TUBB1-201ENST00000217133 CXCL5P42830 114 aa6.96□□□□□ -1.29
TUBB1-201ENST00000217133 WFDC11Q8NEX6 87 aa6.96□□□□□ -1.29
TUBB1-201ENST00000217133 COX7CP15954 63 aa6.96□□□□□ -1.3
TUBB1-201ENST00000217133 AVPP01185 164 aa6.96□□□□□ -1.3
TUBB1-201ENST00000217133 RPL36AP83881 106 aaKnown RBP6.96□□□□□ -1.3
TUBB1-201ENST00000217133 DEFB112Q30KQ8 113 aa6.96□□□□□ -1.3
TUBB1-201ENST00000217133 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
TUBB1-201ENST00000217133 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
TUBB1-201ENST00000217133 RPL36ALQ969Q0 106 aaKnown RBP6.96□□□□□ -1.3
TUBB1-201ENST00000217133 TRGV1A0A0A0MS02 117 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 RBMY1BA6NDE4 496 aaKnown RBP6.95□□□□□ -1.3
TUBB1-201ENST00000217133 RBMY1EA6NEQ0 496 aaKnown RBP6.95□□□□□ -1.3
TUBB1-201ENST00000217133 ATOX1O00244 68 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 RBMY1DP0C7P1 496 aaKnown RBP6.95□□□□□ -1.3
TUBB1-201ENST00000217133 DEFB113Q30KQ7 82 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 LOC107984640A0A0U1RRK4 108 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 INSP01308 110 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 DEFB136Q30KP8 78 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 KHDC1LQ5JSQ8 128 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 RNF152Q8N8N0 203 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 Q96MF0 132 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 NF1P21359 2839 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 IGKV3OR2-268A0A0C4DH90 116 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 TMEM89A2RUT3 159 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 UBE2L6O14933 153 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 SLURP1P55000 103 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 DYNLRB2Q8TF09 96 aa6.95□□□□□ -1.3
TUBB1-201ENST00000217133 J3KT08 172 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 XCL2Q9UBD3 114 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
TUBB1-201ENST00000217133 B4DSR2 109 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 LINC00158P58513 81 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 OVOL2Q9BRP0 275 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 C14orf132Q9NPU4 83 aa6.94□□□□□ -1.3
TUBB1-201ENST00000217133 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 PF4P02776 101 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 UBE2E2Q96LR5 201 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 A0A1B0GX51 115 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
TUBB1-201ENST00000217133 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
TUBB1-201ENST00000217133 C11orf72Q8NBR9 251 aa6.92□□□□□ -1.3
TUBB1-201ENST00000217133 JMJD1CQ15652 2540 aa6.92□□□□□ -1.3
TUBB1-201ENST00000217133 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 MAP6D1Q9H9H5 199 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 HIVEP1P15822 2718 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 LRRC75A-AS1Q8N1F1 130 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
TUBB1-201ENST00000217133 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
TUBB1-201ENST00000217133 A0A087WYN8 130 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 K7EQD1 137 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 LECT2O14960 151 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
TUBB1-201ENST00000217133 KRTAP1-3Q8IUG1 177 aa6.91□□□□□ -1.3
TUBB1-201ENST00000217133 F5H768 121 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 PAX4O43316 350 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 COX7B2Q8TF08 81 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 SMR3AQ99954 134 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
TUBB1-201ENST00000217133 H0YGX0 51 aa6.9□□□□□ -1.31
TUBB1-201ENST00000217133 CRYGAP11844 174 aa6.9□□□□□ -1.31
TUBB1-201ENST00000217133 C18orf65Q6ZTR6 163 aa6.9□□□□□ -1.31
TUBB1-201ENST00000217133 PFN2P35080 140 aa6.89□□□□□ -1.31
TUBB1-201ENST00000217133 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
TUBB1-201ENST00000217133 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
TUBB1-201ENST00000217133 A0A087WVE0 104 aa6.89□□□□□ -1.31
TUBB1-201ENST00000217133 TRBV10-1A0A0K0K1A3 114 aa6.89□□□□□ -1.31
TUBB1-201ENST00000217133 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
TUBB1-201ENST00000217133 STHQ8IWL8 128 aa6.89□□□□□ -1.31
TUBB1-201ENST00000217133 HIVEP2P31629 2446 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 A8MTW9 85 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 Q6ZTI0 123 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 MAST4O15021 2626 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 NCR3O14931 201 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 A0A096LNT2 108 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
TUBB1-201ENST00000217133 Q6JHZ5 121 aa6.88□□□□□ -1.31
TUBB1-201ENST00000217133 SLPIP03973 132 aa6.87□□□□□ -1.31
TUBB1-201ENST00000217133 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
TUBB1-201ENST00000217133 F8P00451 2351 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms