RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 Q8N2B8 174 aa8.14□□□□□ -1.11
ACTN1-201ENST00000193403 MIR7-3HGQ8N6C7 128 aa8.14□□□□□ -1.11
ACTN1-201ENST00000193403 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 NBEAL2Q6ZNJ1 2754 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 PYGO1Q9Y3Y4 419 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 SLPIP03973 132 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 INAFM2P0DMQ5 153 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 VPREB3Q9UKI3 123 aa8.13□□□□□ -1.11
ACTN1-201ENST00000193403 PSMB8P28062 276 aa8.12□□□□□ -1.11
ACTN1-201ENST00000193403 LITAFQ99732 161 aa8.12□□□□□ -1.11
ACTN1-201ENST00000193403 NF1P21359 2839 aa8.12□□□□□ -1.11
ACTN1-201ENST00000193403 WFDC10AQ9H1F0 79 aa8.12□□□□□ -1.11
ACTN1-201ENST00000193403 XCL1P47992 114 aa8.12□□□□□ -1.11
ACTN1-201ENST00000193403 SETXQ7Z333 2677 aaKnown RBP8.11□□□□□ -1.11
ACTN1-201ENST00000193403 LECT2O14960 151 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 NDUFA1O15239 70 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 Q6ZTI0 123 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 VPS13CQ709C8 3753 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 TIRAPP58753 221 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 LINC00643Q86TS7 51 aa8.11□□□□□ -1.11
ACTN1-201ENST00000193403 A0A1B0GX51 115 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 Q6Q795 121 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 TMEM243Q9BU79 118 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 MALP21145 153 aa8.1□□□□□ -1.11
ACTN1-201ENST00000193403 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-201ENST00000193403 CITED2Q99967 270 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-201ENST00000193403 ACYP1P07311 99 aa8.09□□□□□ -1.11
ACTN1-201ENST00000193403 WFDC11Q8NEX6 87 aa8.09□□□□□ -1.11
ACTN1-201ENST00000193403 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
ACTN1-201ENST00000193403 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
ACTN1-201ENST00000193403 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
ACTN1-201ENST00000193403 RBMY1BA6NDE4 496 aaKnown RBP8.09□□□□□ -1.12
ACTN1-201ENST00000193403 RBMY1EA6NEQ0 496 aaKnown RBP8.09□□□□□ -1.12
ACTN1-201ENST00000193403 RBMY1DP0C7P1 496 aaKnown RBP8.09□□□□□ -1.12
ACTN1-201ENST00000193403 APCP25054 2843 aa8.09□□□□□ -1.12
ACTN1-201ENST00000193403 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
ACTN1-201ENST00000193403 A0A087WVE0 104 aa8.08□□□□□ -1.12
ACTN1-201ENST00000193403 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
ACTN1-201ENST00000193403 LOC100131303A0A0U1RQF7 123 aa8.08□□□□□ -1.12
ACTN1-201ENST00000193403 NCR3O14931 201 aa8.08□□□□□ -1.12
ACTN1-201ENST00000193403 K7EQD1 137 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 TENM4Q6N022 2769 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 FAM218AQ96MZ4 157 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
ACTN1-201ENST00000193403 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 BAHCC1Q9P281 2608 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 CCL24O00175 119 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-201ENST00000193403 M0QXV9 152 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
ACTN1-201ENST00000193403 FAM240AA0A1B0GVK7 77 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 FBN2P35556 2912 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.12
ACTN1-201ENST00000193403 UQCRQO14949 82 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 TRACP01848 142 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
ACTN1-201ENST00000193403 S100A7L2Q5SY68 101 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 DSCR9P59020 149 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 KLK9Q2XQG4 91 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 TMEM86BQ8N661 226 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 WFDC9Q8NEX5 89 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 A0A087WYN8 130 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 TMEM89A2RUT3 159 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 TIMM17BO60830 172 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 SMR3AQ99954 134 aa8.04□□□□□ -1.12
ACTN1-201ENST00000193403 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
ACTN1-201ENST00000193403 LAMTOR3Q9UHA4 124 aa8.02□□□□□ -1.13
ACTN1-201ENST00000193403 ANGP03950 147 aaKnown RBP8.02□□□□□ -1.13
ACTN1-201ENST00000193403 ATOX1O00244 68 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 MAST4O15021 2626 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 ZFHX3Q15911 3703 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 TRAV23DV6A0A075B6W5 121 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 F5H768 121 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 LINC00526Q96FQ7 95 aa8.01□□□□□ -1.13
ACTN1-201ENST00000193403 J3KT08 172 aa8□□□□□ -1.13
ACTN1-201ENST00000193403 FAM104AQ969W3 186 aa8□□□□□ -1.13
ACTN1-201ENST00000193403 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
ACTN1-201ENST00000193403 ORMDL1Q9P0S3 153 aa8□□□□□ -1.13
ACTN1-201ENST00000193403 HAMPP81172 84 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 ZNF702PQ9H963 129 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 GYPEP15421 78 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 CCL18P55774 89 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
ACTN1-201ENST00000193403 DEFB114Q30KQ6 69 aa7.99□□□□□ -1.13
ACTN1-201ENST00000193403 NTM-AS1Q6ZSK4 140 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms