RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CHTOPQ9Y3Y2 248 aaKnown RBP9.12□□□□□ -0.95
PHGDH-221ENST00000641573 IGLV4-3A0A075B6K6 122 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 A0A096LPF7 62 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 PMVKQ15126 192 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-221ENST00000641573 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
PHGDH-221ENST00000641573 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
PHGDH-221ENST00000641573 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 TRBV6-8A0A0A6YYG3 113 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 hDV102S1A0JD36 115 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 DPM2O94777 84 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 IGKCP01834 107 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 NPSP0C0P6 89 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 MRPL23Q16540 153 aaKnown RBP9.1□□□□□ -0.95
PHGDH-221ENST00000641573 SPATA45Q537H7 98 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 VCX2Q9H322 139 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
PHGDH-221ENST00000641573 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 F8VRH5 84 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 H7C423 109 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 UBE2L6O14933 153 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 FGF6P10767 208 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 PKIAP61925 76 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 SMAGPQ0VAQ4 97 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 DGAT2L7PQ6IED9 249 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 FAM104AQ969W3 186 aa9.09□□□□□ -0.95
PHGDH-221ENST00000641573 PCP4L1A6NKN8 68 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
PHGDH-221ENST00000641573 GAGE6Q13070 117 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 Q6ZUT4 128 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 SH2D6Q7Z4S9 175 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
PHGDH-221ENST00000641573 AMELXQ99217 191 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 CHCHD5Q9BSY4 110 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 HERC2O95714 4834 aa9.08□□□□□ -0.96
PHGDH-221ENST00000641573 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
PHGDH-221ENST00000641573 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
PHGDH-221ENST00000641573 H3BNG1 76 aa9.07□□□□□ -0.96
PHGDH-221ENST00000641573 PLNP26678 52 aa9.07□□□□□ -0.96
PHGDH-221ENST00000641573 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
PHGDH-221ENST00000641573 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
PHGDH-221ENST00000641573 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
PHGDH-221ENST00000641573 STPG4Q8N801 248 aa9.06□□□□□ -0.96
PHGDH-221ENST00000641573 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
PHGDH-221ENST00000641573 TMEM101Q96IK0 257 aa9.06□□□□□ -0.96
PHGDH-221ENST00000641573 CSDC2Q9Y534 153 aaKnown RBP9.06□□□□□ -0.96
PHGDH-221ENST00000641573 TRAV10A0A0B4J240 114 aa9.05□□□□□ -0.96
PHGDH-221ENST00000641573 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
PHGDH-221ENST00000641573 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
PHGDH-221ENST00000641573 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-221ENST00000641573 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
PHGDH-221ENST00000641573 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
PHGDH-221ENST00000641573 A0A0J9YXV3 536 aa9.03□□□□□ -0.96
PHGDH-221ENST00000641573 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
PHGDH-221ENST00000641573 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 TCTAP57738 103 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 LELP1Q5T871 98 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 NFE4Q86UQ8 179 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 CHAC1Q9BUX1 264 aa9.02□□□□□ -0.97
PHGDH-221ENST00000641573 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
PHGDH-221ENST00000641573 UBE2D1P51668 147 aa9.01□□□□□ -0.97
PHGDH-221ENST00000641573 TIRAPP58753 221 aa9.01□□□□□ -0.97
PHGDH-221ENST00000641573 LY6G6CO95867 125 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 RBX1P62877 108 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 MIEN1Q9BRT3 115 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 UQCR10Q9UDW1 63 aa9□□□□□ -0.97
PHGDH-221ENST00000641573 A0A1B0GUV1 79 aa8.99□□□□□ -0.97
PHGDH-221ENST00000641573 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
PHGDH-221ENST00000641573 DDTP30046 118 aa8.99□□□□□ -0.97
PHGDH-221ENST00000641573 NMUP48645 174 aa8.99□□□□□ -0.97
PHGDH-221ENST00000641573 MPV17L2Q567V2 206 aa8.99□□□□□ -0.97
PHGDH-221ENST00000641573 RYR1P21817 5038 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 TRAV13-1A0A0B4J241 112 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 COX8AP10176 69 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 ZNF22P17026 224 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-221ENST00000641573 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
PHGDH-221ENST00000641573 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
PHGDH-221ENST00000641573 FRAS1Q86XX4 4008 aa8.97□□□□□ -0.97
PHGDH-221ENST00000641573 HERVK_113P61574 105 aa8.97□□□□□ -0.97
PHGDH-221ENST00000641573 ESRGQ1W209 222 aa8.97□□□□□ -0.97
PHGDH-221ENST00000641573 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
PHGDH-221ENST00000641573 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
PHGDH-221ENST00000641573 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
PHGDH-221ENST00000641573 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
PHGDH-221ENST00000641573 TMEM223A0PJW6 202 aa8.96□□□□□ -0.98
PHGDH-221ENST00000641573 E9PLD3 99 aa8.96□□□□□ -0.98
PHGDH-221ENST00000641573 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.98
PHGDH-221ENST00000641573 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
PHGDH-221ENST00000641573 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms