RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 FCER1GP30273 86 aa10.72□□□□□ -0.69
RGPD1-205ENST00000641339 OR5A1Q8NGJ0 315 aa10.72□□□□□ -0.69
RGPD1-205ENST00000641339 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
RGPD1-205ENST00000641339 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
RGPD1-205ENST00000641339 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 PHOX2AO14813 284 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 IMMP2LQ96T52 175 aa10.71□□□□□ -0.69
RGPD1-205ENST00000641339 TMEM136Q6ZRR5 245 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 ZNF664Q8N3J9 261 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 CLRN3Q8NCR9 226 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
RGPD1-205ENST00000641339 SMIM2Q9BVW6 85 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
RGPD1-205ENST00000641339 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
RGPD1-205ENST00000641339 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
RGPD1-205ENST00000641339 SMR3BP02814 79 aaPredicted RBP10.69□□□□□ -0.7
RGPD1-205ENST00000641339 SLPIP03973 132 aa10.69□□□□□ -0.7
RGPD1-205ENST00000641339 C10orf91Q5T1B1 145 aa10.69□□□□□ -0.7
RGPD1-205ENST00000641339 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
RGPD1-205ENST00000641339 FOXI1Q12951 378 aa10.68□□□□□ -0.7
RGPD1-205ENST00000641339 C15orf56Q8N910 161 aa10.68□□□□□ -0.7
RGPD1-205ENST00000641339 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
RGPD1-205ENST00000641339 CTDSP1Q9GZU7 261 aa10.68□□□□□ -0.7
RGPD1-205ENST00000641339 TCAPO15273 167 aa10.67□□□□□ -0.7
RGPD1-205ENST00000641339 C9orf163Q8N9P6 203 aa10.67□□□□□ -0.7
RGPD1-205ENST00000641339 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
RGPD1-205ENST00000641339 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
RGPD1-205ENST00000641339 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
RGPD1-205ENST00000641339 CNBPP62633 177 aaKnown RBP10.66□□□□□ -0.7
RGPD1-205ENST00000641339 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
RGPD1-205ENST00000641339 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
RGPD1-205ENST00000641339 CCL25O15444 150 aa10.65□□□□□ -0.7
RGPD1-205ENST00000641339 XCL1P47992 114 aa10.65□□□□□ -0.7
RGPD1-205ENST00000641339 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
RGPD1-205ENST00000641339 CARHSP1Q9Y2V2 147 aaKnown RBP10.65□□□□□ -0.7
RGPD1-205ENST00000641339 RNASE13Q5GAN3 156 aaKnown RBP10.64□□□□□ -0.71
RGPD1-205ENST00000641339 Q5VSD8 79 aa10.64□□□□□ -0.71
RGPD1-205ENST00000641339 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
RGPD1-205ENST00000641339 TMEM18Q96B42 140 aa10.64□□□□□ -0.71
RGPD1-205ENST00000641339 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
RGPD1-205ENST00000641339 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
RGPD1-205ENST00000641339 SS18Q15532 418 aa10.63□□□□□ -0.71
RGPD1-205ENST00000641339 CFAP161Q6P656 301 aa10.63□□□□□ -0.71
RGPD1-205ENST00000641339 Q6ZUT4 128 aa10.63□□□□□ -0.71
RGPD1-205ENST00000641339 SCXQ7RTU7 201 aa10.63□□□□□ -0.71
RGPD1-205ENST00000641339 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
RGPD1-205ENST00000641339 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
RGPD1-205ENST00000641339 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
RGPD1-205ENST00000641339 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
RGPD1-205ENST00000641339 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
RGPD1-205ENST00000641339 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
RGPD1-205ENST00000641339 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
RGPD1-205ENST00000641339 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
RGPD1-205ENST00000641339 C1orf196B1AJZ1 125 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 PANO1I0J062 215 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 RAB5AP20339 215 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 Q8N8P6 123 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 SPANXA1Q9NS26 97 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
RGPD1-205ENST00000641339 SRRM2Q9UQ35 2752 aaKnown RBP10.59□□□□□ -0.71
RGPD1-205ENST00000641339 TRAV13-1A0A0B4J241 112 aa10.59□□□□□ -0.71
RGPD1-205ENST00000641339 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
RGPD1-205ENST00000641339 MRPS36P82909 103 aaKnown RBP10.59□□□□□ -0.71
RGPD1-205ENST00000641339 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
RGPD1-205ENST00000641339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.59□□□□□ -0.71
RGPD1-205ENST00000641339 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
RGPD1-205ENST00000641339 S100PP25815 95 aa10.58□□□□□ -0.72
RGPD1-205ENST00000641339 RHEBQ15382 184 aa10.58□□□□□ -0.72
RGPD1-205ENST00000641339 RPS10P5Q9NQ39 176 aa10.58□□□□□ -0.72
RGPD1-205ENST00000641339 HERC1Q15751 4861 aa10.57□□□□□ -0.72
RGPD1-205ENST00000641339 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
RGPD1-205ENST00000641339 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.57□□□□□ -0.72
RGPD1-205ENST00000641339 IGHV1-58A0A0C4DH39 117 aa10.57□□□□□ -0.72
RGPD1-205ENST00000641339 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
RGPD1-205ENST00000641339 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
RGPD1-205ENST00000641339 IGHV3-64A0A075B6Q5 118 aa10.56□□□□□ -0.72
RGPD1-205ENST00000641339 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
RGPD1-205ENST00000641339 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
RGPD1-205ENST00000641339 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
RGPD1-205ENST00000641339 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
RGPD1-205ENST00000641339 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
RGPD1-205ENST00000641339 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
RGPD1-205ENST00000641339 K7EMI3 77 aa10.54□□□□□ -0.72
RGPD1-205ENST00000641339 COX7A2LO14548 114 aa10.54□□□□□ -0.72
RGPD1-205ENST00000641339 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
RGPD1-205ENST00000641339 APOC3P02656 99 aa10.53□□□□□ -0.72
RGPD1-205ENST00000641339 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
RGPD1-205ENST00000641339 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
RGPD1-205ENST00000641339 C5orf38Q86SI9 138 aa10.53□□□□□ -0.72
RGPD1-205ENST00000641339 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
RGPD1-205ENST00000641339 MYCBP2O75592 4640 aa10.52□□□□□ -0.72
RGPD1-205ENST00000641339 IGHV3OR16-9A0A0B4J2B5 98 aa10.52□□□□□ -0.73
RGPD1-205ENST00000641339 CHTF8P0CG12 524 aa10.52□□□□□ -0.73
RGPD1-205ENST00000641339 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
RGPD1-205ENST00000641339 COX6A2Q02221 97 aa10.52□□□□□ -0.73
RGPD1-205ENST00000641339 PRSS3P2Q8NHM4 247 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms