RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 Q6ZSN1 163 aa10.08□□□□□ -0.8
SCARB2-227ENST00000640957 CITED2Q99967 270 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-227ENST00000640957 IGHV1-69P01742 117 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 IGHG2P01859 326 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 MIAQ16674 131 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 C11orf44Q8N8P7 122 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 KIR2DL5BQ8NHK3 375 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 Q9H8V8 135 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 LENEPQ9Y5L5 61 aa10.07□□□□□ -0.8
SCARB2-227ENST00000640957 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
SCARB2-227ENST00000640957 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 FAM104AQ969W3 186 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 CSDC2Q9Y534 153 aaKnown RBP10.06□□□□□ -0.8
SCARB2-227ENST00000640957 H3BT86 120 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 CHD6Q8TD26 2715 aa10.06□□□□□ -0.8
SCARB2-227ENST00000640957 COX6A2Q02221 97 aa10.05□□□□□ -0.8
SCARB2-227ENST00000640957 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-227ENST00000640957 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
SCARB2-227ENST00000640957 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
SCARB2-227ENST00000640957 DGAT2L7PQ6IED9 249 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 NBEAL2Q6ZNJ1 2754 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 KLLNB2CW77 178 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 IGHV3OR16-12A0A075B7B8 117 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
SCARB2-227ENST00000640957 USP24Q9UPU5 2620 aa10.03□□□□□ -0.8
SCARB2-227ENST00000640957 ATP5G1P05496 136 aa10.03□□□□□ -0.8
SCARB2-227ENST00000640957 TIRAPP58753 221 aa10.03□□□□□ -0.8
SCARB2-227ENST00000640957 FAM19A4Q96LR4 140 aa10.03□□□□□ -0.8
SCARB2-227ENST00000640957 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
SCARB2-227ENST00000640957 NDUFA4O00483 81 aa10.02□□□□□ -0.8
SCARB2-227ENST00000640957 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.8
SCARB2-227ENST00000640957 DSCR8Q96T75 97 aa10.02□□□□□ -0.8
SCARB2-227ENST00000640957 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.81
SCARB2-227ENST00000640957 IGHV4-59P01825 116 aa10.02□□□□□ -0.81
SCARB2-227ENST00000640957 C14orf132Q9NPU4 83 aa10.02□□□□□ -0.81
SCARB2-227ENST00000640957 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 RBMY1A1P0DJD3 496 aaKnown RBP10.01□□□□□ -0.81
SCARB2-227ENST00000640957 RBMY1CP0DJD4 496 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 CFHR3Q02985 330 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
SCARB2-227ENST00000640957 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 FLNAP21333 2647 aaKnown RBP10.01□□□□□ -0.81
SCARB2-227ENST00000640957 AVPP01185 164 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 SLPIP03973 132 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 TMEM126AQ9H061 195 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 HECTD1Q9ULT8 2610 aa10.01□□□□□ -0.81
SCARB2-227ENST00000640957 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
SCARB2-227ENST00000640957 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
SCARB2-227ENST00000640957 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
SCARB2-227ENST00000640957 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
SCARB2-227ENST00000640957 DCANP1Q8TF63 244 aa10□□□□□ -0.81
SCARB2-227ENST00000640957 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
SCARB2-227ENST00000640957 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 MSMBP08118 114 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 PRIMA1Q86XR5 153 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 RNF152Q8N8N0 203 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 FAM223BA6NKX1 122 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 FAM223AQ8IWN6 122 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
SCARB2-227ENST00000640957 A0A1B0GX51 115 aa9.98□□□□□ -0.81
SCARB2-227ENST00000640957 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
SCARB2-227ENST00000640957 AKAP9Q99996 3911 aa9.98□□□□□ -0.81
SCARB2-227ENST00000640957 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
SCARB2-227ENST00000640957 HIST1H4AP62805 103 aaKnown RBP9.97□□□□□ -0.81
SCARB2-227ENST00000640957 DEFB112Q30KQ8 113 aa9.97□□□□□ -0.81
SCARB2-227ENST00000640957 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
SCARB2-227ENST00000640957 SPANXCQ9NY87 97 aa9.97□□□□□ -0.81
SCARB2-227ENST00000640957 UQCRQO14949 82 aa9.96□□□□□ -0.81
SCARB2-227ENST00000640957 ITPR3Q14573 2671 aa9.96□□□□□ -0.81
SCARB2-227ENST00000640957 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
SCARB2-227ENST00000640957 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
SCARB2-227ENST00000640957 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
SCARB2-227ENST00000640957 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
SCARB2-227ENST00000640957 A0A0J9YX75 114 aa9.95□□□□□ -0.82
SCARB2-227ENST00000640957 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
SCARB2-227ENST00000640957 COX7A2LO14548 114 aa9.95□□□□□ -0.82
SCARB2-227ENST00000640957 CHCHD7Q9BUK0 85 aa9.95□□□□□ -0.82
SCARB2-227ENST00000640957 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
SCARB2-227ENST00000640957 FAM240AA0A1B0GVK7 77 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 NCR3O14931 201 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 SNRPD3P62318 126 aaKnown RBP9.94□□□□□ -0.82
SCARB2-227ENST00000640957 APRG1Q8IVJ8 170 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 A0A1W2PRX2 142 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 C10orf105Q8TEF2 133 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 PEMTQ9UBM1 199 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 C22orf24Q9Y442 160 aa9.94□□□□□ -0.82
SCARB2-227ENST00000640957 A0A087WYN8 130 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 DEFB131AP59861 70 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 HILS1P60008 231 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 B4DSR2 109 aa9.93□□□□□ -0.82
SCARB2-227ENST00000640957 HRCT1Q6UXD1 115 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms