RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
LPP-222ENST00000640853 TINCRA0A1B0GVN0 87 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 E7EUB6 86 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 J3KT08 172 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 RNF223E7ERA6 249 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 DAND5Q8N907 189 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 CFHR3Q02985 330 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 IGKV2-30P06310 120 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 NDUFA11Q86Y39 141 aa2.34□□□□□ -2.03
LPP-222ENST00000640853 HHLA3Q9XRX5 114 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 COX7A2LO14548 114 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 IGLV6-57P01721 117 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 IGHV4-61A0A0C4DH41 118 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 LY6LH3BQJ8 138 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 C1orf229Q6ZS94 237 aaPredicted RBP2.34□□□□□ -2.04
LPP-222ENST00000640853 X6R8D5 127 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 PRAC2D3DTV9 90 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 IMUPQ9GZP8 106 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 MAPKAPK5-AS1Q8N8E1 139 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 NTN5Q8WTR8 489 aaPredicted RBP2.34□□□□□ -2.04
LPP-222ENST00000640853 C16orf74Q96GX8 76 aa2.34□□□□□ -2.04
LPP-222ENST00000640853 IGHV4OR15-8A0A075B7B6 117 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 A0A087WW49 117 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 C11orf86A6NJI1 115 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 MRPS36P82909 103 aaKnown RBP2.33□□□□□ -2.04
LPP-222ENST00000640853 Q8N1Y9 231 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 CELA1Q9UNI1 258 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 MYCNOSP40205 109 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 FANCD2OSQ96PS1 177 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 XCL1P47992 114 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
LPP-222ENST00000640853 SPRY2O43597 315 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
LPP-222ENST00000640853 LINC01620Q4KN68 170 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 LINC00167Q96N53 147 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 ITPR3Q14573 2671 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 H7C423 109 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 PLA2G2DQ9UNK4 145 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
LPP-222ENST00000640853 ATOX1O00244 68 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 NEXN-AS1Q8NBZ9 246 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 MIAQ16674 131 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 COX7B2Q8TF08 81 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 TP73-AS1Q9UF72 201 aa2.33□□□□□ -2.04
LPP-222ENST00000640853 IGHV3-38A0A0C4DH36 116 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 TIMM17BO60830 172 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 UNC79Q9P2D8 2635 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 TRAV4A0A0B4J268 109 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 CRYGDP07320 174 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 NREPQ16612 68 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 Q6Q795 121 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
LPP-222ENST00000640853 HILS1P60008 231 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 NFE4Q86UQ8 179 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 NUP210Q8TEM1 1887 aaPredicted RBP2.32□□□□□ -2.04
LPP-222ENST00000640853 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 A0A0J9YXV3 536 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 CTSZQ9UBR2 303 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 K7EQD1 137 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 J3QKU1 62 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 FBXL19-AS1Q494R0 122 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 HELZ2Q9BYK8 2649 aaKnown RBP2.32□□□□□ -2.04
LPP-222ENST00000640853 SMIM1B2RUZ4 78 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 BLCAPP62952 87 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 C5orf38Q86SI9 138 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 IGHV4-4A0A075B6R2 117 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 M0QY20 66 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 IGLV1-47P01700 117 aa2.32□□□□□ -2.04
LPP-222ENST00000640853 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 DEFB112Q30KQ8 113 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 IGLV5-45A0A087WSX0 123 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 EBI3Q14213 229 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 PTPRBP23467 1997 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 UNC80Q8N2C7 3258 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
LPP-222ENST00000640853 Q6ZUT4 128 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 C19orf84I3L1E1 186 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 TNFRSF13BO14836 293 aaPredicted RBP2.31□□□□□ -2.04
LPP-222ENST00000640853 CXCL6P80162 114 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 Q8NA96 180 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 KIF26AQ9ULI4 1882 aaPredicted RBP2.31□□□□□ -2.04
LPP-222ENST00000640853 TRAV10A0A0B4J240 114 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 IGHV4-28A0A0C4DH34 117 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 TMEM223A0PJW6 202 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 UBE2D1P51668 147 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 SMAD5-AS1Q9Y6J3 95 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 CFAP46Q8IYW2 2715 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 TEP1Q99973 2627 aaKnown RBP2.31□□□□□ -2.04
LPP-222ENST00000640853 IGLC6P0CF74 106 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 PIK3CD-AS1Q5SR53 167 aa2.31□□□□□ -2.04
LPP-222ENST00000640853 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms