RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 DEFB1P60022 68 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-210ENST00000640652 FAM240AA0A1B0GVK7 77 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 IGKV2-29A2NJV5 120 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-210ENST00000640652 H7C423 109 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 CFAP161Q6P656 301 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 JPT2Q9H910 190 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 PF4P02776 101 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 CDSNQ15517 529 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 C16orf74Q96GX8 76 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 TEX49A0A1B0GTD5 131 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 NDUFA1O15239 70 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 RNASE13Q5GAN3 156 aaKnown RBP4.14□□□□□ -1.75
SCN3A-210ENST00000640652 PRORYQ9H606 182 aa4.14□□□□□ -1.75
SCN3A-210ENST00000640652 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 RNF223E7ERA6 249 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-210ENST00000640652 SLURP1P55000 103 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 XCL2Q9UBD3 114 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 NOTCH1P46531 2555 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 LINC00158P58513 81 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 DEFB136Q30KP8 78 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 NDUFV3P56181 108 aaKnown RBP4.13□□□□□ -1.75
SCN3A-210ENST00000640652 STAB1Q9NY15 2570 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 SS18Q15532 418 aa4.13□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE12JA6NER3 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE7O76087 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE4Q13068 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 OR13C6PQ8NH95 151 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 PAX4O43316 350 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 IGHV3-53P01767 116 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 ATP5G1P05496 136 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE2AQ6NT46 116 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 NTN5Q8WTR8 489 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-210ENST00000640652 TRAV4A0A0B4J268 109 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE5Q13069 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 GAGE6Q13070 117 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 TRIAP1O43715 76 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 TIRAPP58753 221 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 CRYGDP07320 174 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 C15orf53Q8NAA6 179 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 OPRPNQ99935 248 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-210ENST00000640652 SVEP1Q4LDE5 3571 aa4.12□□□□□ -1.75
SCN3A-210ENST00000640652 A0A0U1RRA0 63 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 MT-ATP8P03928 68 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 Q6ZQT7 251 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 EDA2RQ9HAV5 297 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 TMEM61Q8N0U2 210 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 IGHV3-38A0A0C4DH36 116 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 CFHR3Q02985 330 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 MRPL23Q16540 153 aaKnown RBP4.11□□□□□ -1.75
SCN3A-210ENST00000640652 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 LINC00467Q9BRT7 94 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 MAP6D1Q9H9H5 199 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 COX7B2Q8TF08 81 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 CCL24O00175 119 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 H0YGX0 51 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 COX7A2LO14548 114 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 PTH2Q96A98 100 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 AMELXQ99217 191 aa4.11□□□□□ -1.75
SCN3A-210ENST00000640652 NOP10Q9NPE3 64 aaKnown RBP4.11□□□□□ -1.75
SCN3A-210ENST00000640652 Q6YL49 198 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 ZFHX3Q15911 3703 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-210ENST00000640652 RELNP78509 3460 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 A0A1W2PPR1 153 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 LST1O00453 97 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 Q6ZS46 218 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 UBE2D4Q9Y2X8 147 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 AKAP9Q99996 3911 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 ZNF625Q96I27 306 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-210ENST00000640652 KIF25-AS1Q9Y6Z4 181 aa4.1□□□□□ -1.75
SCN3A-210ENST00000640652 C19orf84I3L1E1 186 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 CLEC2BQ92478 149 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 COL6A5A8TX70 2615 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 DAND5Q8N907 189 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 CLUHP3Q96NS8 147 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 RNASE1P07998 156 aaKnown RBP4.09□□□□□ -1.75
SCN3A-210ENST00000640652 RPL35AP18077 110 aaKnown RBP4.09□□□□□ -1.75
SCN3A-210ENST00000640652 Q96MF0 132 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 TMEM126AQ9H061 195 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 PRO0461Q9UI25 63 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 TRACP01848 142 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 MAPK1IP1LQ8NDC0 245 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 TSPEAR-AS2P59090 65 aa4.09□□□□□ -1.75
SCN3A-210ENST00000640652 BAALC-AS2P0C853 105 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 DEFB113Q30KQ7 82 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 Q6Q795 121 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 H3BQ85 93 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms