RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 VCYO14598 125 aa11.1□□□□□ -0.63
SPIN3-228ENST00000639794 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
SPIN3-228ENST00000639794 NPYP01303 97 aa11.1□□□□□ -0.63
SPIN3-228ENST00000639794 GCSHP23434 173 aa11.1□□□□□ -0.63
SPIN3-228ENST00000639794 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
SPIN3-228ENST00000639794 PPP1R17O96001 155 aa11.09□□□□□ -0.63
SPIN3-228ENST00000639794 HAMPP81172 84 aa11.09□□□□□ -0.63
SPIN3-228ENST00000639794 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
SPIN3-228ENST00000639794 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
SPIN3-228ENST00000639794 FABP9Q0Z7S8 132 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BKO60814 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BJP06899 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 ESDP10768 282 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BOP23527 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BBP33778 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BDP58876 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BCP62807 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST2H2BEQ16778 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.08□□□□□ -0.64
SPIN3-228ENST00000639794 TMEM136Q6ZRR5 245 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BHQ93079 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BNQ99877 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 HIST1H2BMQ99879 126 aa11.08□□□□□ -0.64
SPIN3-228ENST00000639794 USP17L23D6RBM5 183 aa11.07□□□□□ -0.64
SPIN3-228ENST00000639794 MT-ND6P03923 174 aa11.07□□□□□ -0.64
SPIN3-228ENST00000639794 ORMDL3Q8N138 153 aa11.07□□□□□ -0.64
SPIN3-228ENST00000639794 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
SPIN3-228ENST00000639794 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
SPIN3-228ENST00000639794 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
SPIN3-228ENST00000639794 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
SPIN3-228ENST00000639794 OR5A1Q8NGJ0 315 aa11.06□□□□□ -0.64
SPIN3-228ENST00000639794 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
SPIN3-228ENST00000639794 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 C5orf52A6NGY3 159 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 H7C423 109 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 TCAPO15273 167 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 S100A6P06703 90 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 RNASE13Q5GAN3 156 aaKnown RBP11.05□□□□□ -0.64
SPIN3-228ENST00000639794 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
SPIN3-228ENST00000639794 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
SPIN3-228ENST00000639794 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
SPIN3-228ENST00000639794 PPBPP02775 128 aa11.04□□□□□ -0.64
SPIN3-228ENST00000639794 DGAT2L7PQ6IED9 249 aa11.04□□□□□ -0.64
SPIN3-228ENST00000639794 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
SPIN3-228ENST00000639794 NDUFA6P56556 154 aa11.03□□□□□ -0.64
SPIN3-228ENST00000639794 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
SPIN3-228ENST00000639794 RPL39P62891 51 aaKnown RBP11.03□□□□□ -0.64
SPIN3-228ENST00000639794 KRTAP17-1Q9BYP8 105 aa11.03□□□□□ -0.64
SPIN3-228ENST00000639794 ZNF25P17030 456 aaPredicted RBP11.02□□□□□ -0.64
SPIN3-228ENST00000639794 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.64
SPIN3-228ENST00000639794 PRSS1P07477 247 aa11.01□□□□□ -0.65
SPIN3-228ENST00000639794 XCL1P47992 114 aa11.01□□□□□ -0.65
SPIN3-228ENST00000639794 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-228ENST00000639794 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
SPIN3-228ENST00000639794 ZNF664Q8N3J9 261 aa11□□□□□ -0.65
SPIN3-228ENST00000639794 CDC42SE2Q9NRR3 84 aa11□□□□□ -0.65
SPIN3-228ENST00000639794 FAM30AQ9NZY2 134 aa11□□□□□ -0.65
SPIN3-228ENST00000639794 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
SPIN3-228ENST00000639794 DNAH8Q96JB1 4490 aa11□□□□□ -0.65
SPIN3-228ENST00000639794 hDV102S1A0JD36 115 aa10.99□□□□□ -0.65
SPIN3-228ENST00000639794 XGP55808 180 aa10.99□□□□□ -0.65
SPIN3-228ENST00000639794 COA6Q5JTJ3 125 aaKnown RBP10.99□□□□□ -0.65
SPIN3-228ENST00000639794 Q6ZUT4 128 aa10.99□□□□□ -0.65
SPIN3-228ENST00000639794 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
SPIN3-228ENST00000639794 MAP1LC3AQ9H492 121 aa10.99□□□□□ -0.65
SPIN3-228ENST00000639794 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
SPIN3-228ENST00000639794 CCL25O15444 150 aa10.98□□□□□ -0.65
SPIN3-228ENST00000639794 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
SPIN3-228ENST00000639794 KRTAP4-5Q9BYR2 181 aa10.98□□□□□ -0.65
SPIN3-228ENST00000639794 TMEM18Q96B42 140 aa10.98□□□□□ -0.65
SPIN3-228ENST00000639794 OPRPNQ99935 248 aaPredicted RBP10.98□□□□□ -0.65
SPIN3-228ENST00000639794 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
SPIN3-228ENST00000639794 SMR3BP02814 79 aaPredicted RBP10.97□□□□□ -0.65
SPIN3-228ENST00000639794 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
SPIN3-228ENST00000639794 SS18Q15532 418 aa10.95□□□□□ -0.66
SPIN3-228ENST00000639794 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
SPIN3-228ENST00000639794 FOXI1Q12951 378 aa10.95□□□□□ -0.66
SPIN3-228ENST00000639794 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
SPIN3-228ENST00000639794 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
SPIN3-228ENST00000639794 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
SPIN3-228ENST00000639794 ALKBH7Q9BT30 221 aaPredicted RBP10.94□□□□□ -0.66
SPIN3-228ENST00000639794 FAT1Q14517 4588 aa10.93□□□□□ -0.66
SPIN3-228ENST00000639794 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
SPIN3-228ENST00000639794 Q8N8P6 123 aa10.93□□□□□ -0.66
SPIN3-228ENST00000639794 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 AP5S1Q9NUS5 200 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
SPIN3-228ENST00000639794 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 Q8N1X5 172 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 TIMM21Q9BVV7 248 aa10.92□□□□□ -0.66
SPIN3-228ENST00000639794 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
SPIN3-228ENST00000639794 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
SPIN3-228ENST00000639794 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
SPIN3-228ENST00000639794 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
SPIN3-228ENST00000639794 SLPIP03973 132 aa10.9□□□□□ -0.66
SPIN3-228ENST00000639794 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.66
SPIN3-228ENST00000639794 FAM104AQ969W3 186 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms