RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PAX4O43316 350 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 TLX1NBP0CAT3 122 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 RHOHQ15669 191 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 SFTA2Q6UW10 78 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 DAZ4Q86SG3 579 aaKnown RBP4.53□□□□□ -1.68
RTTN-215ENST00000639487 CEND1Q8N111 149 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 AGPAT4-IT1Q9H0P7 198 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 DAZ3Q9NR90 486 aaKnown RBP4.53□□□□□ -1.68
RTTN-215ENST00000639487 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 PHLDA1Q8WV24 401 aaPredicted RBP4.53□□□□□ -1.68
RTTN-215ENST00000639487 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
RTTN-215ENST00000639487 USF3Q68DE3 2245 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 IGHV3-72A0A0B4J1Y9 119 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 KRTAP26-1Q6PEX3 210 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 MXRA5Q9NR99 2828 aa4.53□□□□□ -1.68
RTTN-215ENST00000639487 MAST4O15021 2626 aa4.53□□□□□ -1.69
RTTN-215ENST00000639487 RELNP78509 3460 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 IGHV1-24A0A0C4DH33 117 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 H3BTX0 84 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 TCL1BO95988 128 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 ARL14EPLP0DKL9 152 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
RTTN-215ENST00000639487 COX7CP15954 63 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 C12orf74Q32Q52 190 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 DYNLRB2Q8TF09 96 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
RTTN-215ENST00000639487 RBMY1A1P0DJD3 496 aaKnown RBP4.52□□□□□ -1.69
RTTN-215ENST00000639487 RBMY1CP0DJD4 496 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 FXYD2P54710 66 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 RBMY1FQ15415 496 aaKnown RBP4.52□□□□□ -1.69
RTTN-215ENST00000639487 TTTY13Q9BZ97 58 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 NHP2Q9NX24 153 aaKnown RBP4.52□□□□□ -1.69
RTTN-215ENST00000639487 CSMD3Q7Z407 3707 aa4.52□□□□□ -1.69
RTTN-215ENST00000639487 TRBV27A0A0K0K1C4 114 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 VCYO14598 125 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 MIR17HGQ75NE6 70 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 PRNTQ86SH4 94 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 CNOT1A5YKK6 2376 aaKnown RBP4.51□□□□□ -1.69
RTTN-215ENST00000639487 TMSB15BA0A087X1C1 80 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 CENPWQ5EE01 88 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 IGLV5-37A0A075B6J1 123 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 IGLV2-18A0A075B6J9 118 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 PYYP10082 97 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 FBN1P35555 2871 aaKnown RBP4.51□□□□□ -1.69
RTTN-215ENST00000639487 MIC13Q5XKP0 118 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 RBM12B-AS1Q9P1G2 102 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 HIGD1BQ9P298 99 aa4.51□□□□□ -1.69
RTTN-215ENST00000639487 CDK2AP2O75956 126 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 P0DMU3 169 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 CRIP1P50238 77 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 IGKCP01834 107 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 CNBPP62633 177 aaKnown RBP4.5□□□□□ -1.69
RTTN-215ENST00000639487 FHL2Q14192 279 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 LINC00527Q9UJ94 153 aa4.5□□□□□ -1.69
RTTN-215ENST00000639487 ATP5G1P05496 136 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 UBE2D3P61077 147 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 UBE2D2P62837 147 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 NUP35Q8NFH5 326 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 SVILO95425 2214 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 FXYD7P58549 80 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 TRBV7-7A0A0K0K1E9 115 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 LELP1Q5T871 98 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 AP5S1Q9NUS5 200 aa4.49□□□□□ -1.69
RTTN-215ENST00000639487 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 KNCNA6PVL3 124 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 IBA57-AS1B1ANH7 110 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 RNF182Q8N6D2 247 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 ITPR2Q14571 2701 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 TRAV12-2A0A075B6T6 113 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 IGHV3-64DA0A0J9YX35 117 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 HLA-DMBP28068 263 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 HERVK_113P61574 105 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 DPH3P1Q9H4G8 78 aa4.48□□□□□ -1.69
RTTN-215ENST00000639487 IGKV3D-20A0A0C4DH25 116 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 POLR2KP53803 58 aaKnown RBP4.47□□□□□ -1.69
RTTN-215ENST00000639487 Q6ZRU5 148 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 FN1P02751 2386 aaKnown RBP4.47□□□□□ -1.69
RTTN-215ENST00000639487 TRAV8-4A0A0B4J246 113 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 SPANXDQ9BXN6 97 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 RPP21Q9H633 154 aaKnown RBP4.47□□□□□ -1.69
RTTN-215ENST00000639487 UBE2L3P68036 154 aaKnown RBP4.47□□□□□ -1.69
RTTN-215ENST00000639487 SS18Q15532 418 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
RTTN-215ENST00000639487 NXT2Q9NPJ8 142 aaKnown RBP4.47□□□□□ -1.69
RTTN-215ENST00000639487 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.69
RTTN-215ENST00000639487 DNAH5Q8TE73 4624 aa4.46□□□□□ -1.69
RTTN-215ENST00000639487 TEX15Q9BXT5 2789 aa4.46□□□□□ -1.69
RTTN-215ENST00000639487 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
RTTN-215ENST00000639487 H3BT86 120 aa4.46□□□□□ -1.7
RTTN-215ENST00000639487 H3BVH4 76 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 362.7 ms