RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SUMO2P61956 95 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-259ENST00000638114 MRPL51Q4U2R6 128 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-259ENST00000638114 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-259ENST00000638114 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 SLPIP03973 132 aa10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 HIGD2BQ4VC39 106 aa10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 MRPL52Q86TS9 123 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
CACNA1A-259ENST00000638114 HERC1Q15751 4861 aa10.75□□□□□ -0.69
CACNA1A-259ENST00000638114 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
CACNA1A-259ENST00000638114 PANO1I0J062 215 aa10.75□□□□□ -0.69
CACNA1A-259ENST00000638114 PPP1R2P9O14990 202 aa10.75□□□□□ -0.69
CACNA1A-259ENST00000638114 XCL1P47992 114 aa10.75□□□□□ -0.69
CACNA1A-259ENST00000638114 CCL25O15444 150 aa10.74□□□□□ -0.69
CACNA1A-259ENST00000638114 CKS2P33552 79 aa10.74□□□□□ -0.69
CACNA1A-259ENST00000638114 HBBP68871 147 aa10.74□□□□□ -0.69
CACNA1A-259ENST00000638114 FOXI1Q12951 378 aa10.74□□□□□ -0.69
CACNA1A-259ENST00000638114 CDC42SE2Q9NRR3 84 aa10.74□□□□□ -0.69
CACNA1A-259ENST00000638114 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
CACNA1A-259ENST00000638114 S100A8P05109 93 aa10.73□□□□□ -0.69
CACNA1A-259ENST00000638114 RAB14P61106 215 aa10.73□□□□□ -0.69
CACNA1A-259ENST00000638114 SS18Q15532 418 aa10.73□□□□□ -0.69
CACNA1A-259ENST00000638114 ZNF664Q8N3J9 261 aa10.73□□□□□ -0.69
CACNA1A-259ENST00000638114 F8W036 122 aa10.72□□□□□ -0.69
CACNA1A-259ENST00000638114 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-259ENST00000638114 SMAGPQ0VAQ4 97 aa10.72□□□□□ -0.69
CACNA1A-259ENST00000638114 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
CACNA1A-259ENST00000638114 GVQW2A0A096LPI5 108 aaPredicted RBP10.71□□□□□ -0.69
CACNA1A-259ENST00000638114 A0A1B0GXF2 115 aa10.71□□□□□ -0.69
CACNA1A-259ENST00000638114 CHTF8P0CG12 524 aa10.71□□□□□ -0.69
CACNA1A-259ENST00000638114 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-259ENST00000638114 DPH3Q96FX2 82 aa10.71□□□□□ -0.69
CACNA1A-259ENST00000638114 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 D6R8Y8 96 aa10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 J3QL48 77 aa10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 TNFRSF6BO95407 300 aa10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 CIRBPQ14011 172 aaKnown RBP10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
CACNA1A-259ENST00000638114 IGHV1-58A0A0C4DH39 117 aa10.69□□□□□ -0.7
CACNA1A-259ENST00000638114 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-259ENST00000638114 TMEM18Q96B42 140 aa10.69□□□□□ -0.7
CACNA1A-259ENST00000638114 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-259ENST00000638114 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 COX6A2Q02221 97 aa10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 PNRC1Q12796 327 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 CD164L2Q6UWJ8 174 aa10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 ATP5L2Q7Z4Y8 100 aa10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
CACNA1A-259ENST00000638114 A0A087WYN8 130 aa10.67□□□□□ -0.7
CACNA1A-259ENST00000638114 TCAPO15273 167 aa10.67□□□□□ -0.7
CACNA1A-259ENST00000638114 NPYP01303 97 aa10.67□□□□□ -0.7
CACNA1A-259ENST00000638114 PPBPP02775 128 aa10.67□□□□□ -0.7
CACNA1A-259ENST00000638114 Q6ZUT4 128 aa10.67□□□□□ -0.7
CACNA1A-259ENST00000638114 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
CACNA1A-259ENST00000638114 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
CACNA1A-259ENST00000638114 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
CACNA1A-259ENST00000638114 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
CACNA1A-259ENST00000638114 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
CACNA1A-259ENST00000638114 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
CACNA1A-259ENST00000638114 PHOX2AO14813 284 aa10.65□□□□□ -0.7
CACNA1A-259ENST00000638114 MT-ND4LP03901 98 aa10.65□□□□□ -0.7
CACNA1A-259ENST00000638114 RPL39P62891 51 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-259ENST00000638114 ORMDL3Q8N138 153 aa10.65□□□□□ -0.7
CACNA1A-259ENST00000638114 IGKV2-24A0A0C4DH68 120 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 ZNF561-AS1K7EIQ3 104 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 MALP21145 153 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 TMEM136Q6ZRR5 245 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
CACNA1A-259ENST00000638114 COX7A2LO14548 114 aa10.63□□□□□ -0.71
CACNA1A-259ENST00000638114 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
CACNA1A-259ENST00000638114 CLLU1Q5K131 121 aa10.63□□□□□ -0.71
CACNA1A-259ENST00000638114 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
CACNA1A-259ENST00000638114 PKHD1L1Q86WI1 4243 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 A0A096LNI7 61 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 RAB5AP20339 215 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 PKIGQ9Y2B9 76 aa10.61□□□□□ -0.71
CACNA1A-259ENST00000638114 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-259ENST00000638114 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
CACNA1A-259ENST00000638114 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-259ENST00000638114 IGLV4-69A0A075B6H9 119 aa10.59□□□□□ -0.71
CACNA1A-259ENST00000638114 STPG4Q8N801 248 aa10.59□□□□□ -0.71
CACNA1A-259ENST00000638114 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-259ENST00000638114 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 APOMO95445 188 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 OXTP01178 125 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 C7orf33Q8WU49 177 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 FAM104AQ969W3 186 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 LAMTOR2Q9Y2Q5 125 aa10.58□□□□□ -0.72
CACNA1A-259ENST00000638114 FAT3Q8TDW7 4589 aa10.57□□□□□ -0.72
CACNA1A-259ENST00000638114 IFITM10A6NMD0 228 aa10.57□□□□□ -0.72
CACNA1A-259ENST00000638114 CAMK2N2Q96S95 79 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms