RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
CACNA1A-249ENST00000637777 TCAPO15273 167 aa9.42□□□□□ -0.9
CACNA1A-249ENST00000637777 NPYP01303 97 aa9.42□□□□□ -0.9
CACNA1A-249ENST00000637777 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-249ENST00000637777 PRSS1P07477 247 aa9.42□□□□□ -0.9
CACNA1A-249ENST00000637777 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 RAB5AP20339 215 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 XCL1P47992 114 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 SS18Q15532 418 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
CACNA1A-249ENST00000637777 LOC389332A0A1B0GUA5 103 aa9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 PHOX2AO14813 284 aa9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 S100PP25815 95 aa9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
CACNA1A-249ENST00000637777 CCL25O15444 150 aa9.39□□□□□ -0.91
CACNA1A-249ENST00000637777 HIGD2BQ4VC39 106 aa9.39□□□□□ -0.91
CACNA1A-249ENST00000637777 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
CACNA1A-249ENST00000637777 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
CACNA1A-249ENST00000637777 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 Q5VSD8 79 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 IMMP2LQ96T52 175 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 CDC42SE2Q9NRR3 84 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
CACNA1A-249ENST00000637777 TRAV13-1A0A0B4J241 112 aa9.37□□□□□ -0.91
CACNA1A-249ENST00000637777 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-249ENST00000637777 Q6ZUT4 128 aa9.37□□□□□ -0.91
CACNA1A-249ENST00000637777 RPS10P5Q9NQ39 176 aa9.36□□□□□ -0.91
CACNA1A-249ENST00000637777 LAMTOR2Q9Y2Q5 125 aa9.36□□□□□ -0.91
CACNA1A-249ENST00000637777 MALP21145 153 aa9.35□□□□□ -0.91
CACNA1A-249ENST00000637777 FOXI1Q12951 378 aa9.35□□□□□ -0.91
CACNA1A-249ENST00000637777 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
CACNA1A-249ENST00000637777 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
CACNA1A-249ENST00000637777 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 IFI27P40305 119 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 NDUFA5Q16718 116 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 Q6ZSA8 131 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 SCXQ7RTU7 201 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-249ENST00000637777 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 RHEBQ15382 184 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
CACNA1A-249ENST00000637777 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
CACNA1A-249ENST00000637777 ZNF561-AS1K7EIQ3 104 aa9.32□□□□□ -0.92
CACNA1A-249ENST00000637777 COX7A2LO14548 114 aa9.32□□□□□ -0.92
CACNA1A-249ENST00000637777 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-249ENST00000637777 ABCA13Q86UQ4 5058 aa9.32□□□□□ -0.92
CACNA1A-249ENST00000637777 IFITM10A6NMD0 228 aa9.31□□□□□ -0.92
CACNA1A-249ENST00000637777 APOC3P02656 99 aa9.31□□□□□ -0.92
CACNA1A-249ENST00000637777 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
CACNA1A-249ENST00000637777 Q8N8P6 123 aa9.31□□□□□ -0.92
CACNA1A-249ENST00000637777 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
CACNA1A-249ENST00000637777 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
CACNA1A-249ENST00000637777 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-249ENST00000637777 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
CACNA1A-249ENST00000637777 C10orf91Q5T1B1 145 aa9.29□□□□□ -0.92
CACNA1A-249ENST00000637777 Q6ZN92 141 aa9.29□□□□□ -0.92
CACNA1A-249ENST00000637777 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
CACNA1A-249ENST00000637777 SNAPINO95295 136 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 APOMO95445 188 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 SLPIP03973 132 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 MRPS36P82909 103 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 COX19Q49B96 90 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 C2orf66Q6UXQ4 117 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 PRSS3P2Q8NHM4 247 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 C2orf88Q9BSF0 95 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
CACNA1A-249ENST00000637777 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 SVBPQ8N300 66 aa9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-249ENST00000637777 FAT1Q14517 4588 aa9.26□□□□□ -0.93
CACNA1A-249ENST00000637777 TGIF2-C20orf24A0A0A6YYL0 155 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms