RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CKS2P33552 79 aa8.92□□□□□ -0.98
PNKP-228ENST00000637325 MRPL54Q6P161 138 aaKnown RBP8.92□□□□□ -0.98
PNKP-228ENST00000637325 NRACQ8N912 160 aa8.92□□□□□ -0.98
PNKP-228ENST00000637325 KIR2DL4Q99706 377 aa8.92□□□□□ -0.98
PNKP-228ENST00000637325 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
PNKP-228ENST00000637325 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
PNKP-228ENST00000637325 HBBP68871 147 aa8.91□□□□□ -0.98
PNKP-228ENST00000637325 SMAGPQ0VAQ4 97 aa8.91□□□□□ -0.98
PNKP-228ENST00000637325 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
PNKP-228ENST00000637325 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
PNKP-228ENST00000637325 SS18Q15532 418 aa8.9□□□□□ -0.98
PNKP-228ENST00000637325 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 XCL1P47992 114 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 MRPL52Q86TS9 123 aaKnown RBP8.89□□□□□ -0.99
PNKP-228ENST00000637325 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 DPH3Q96FX2 82 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 CDC42SE2Q9NRR3 84 aa8.89□□□□□ -0.99
PNKP-228ENST00000637325 D6R8Y8 96 aa8.88□□□□□ -0.99
PNKP-228ENST00000637325 CCL25O15444 150 aa8.88□□□□□ -0.99
PNKP-228ENST00000637325 FOXI1Q12951 378 aa8.88□□□□□ -0.99
PNKP-228ENST00000637325 SDIM1Q6ZPB5 146 aa8.88□□□□□ -0.99
PNKP-228ENST00000637325 TRBV24-1A0A075B6N3 115 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 TCAPO15273 167 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 MT-ND4LP03901 98 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 SLPIP03973 132 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 PNRC1Q12796 327 aaPredicted RBP8.87□□□□□ -0.99
PNKP-228ENST00000637325 ATP5L2Q7Z4Y8 100 aa8.87□□□□□ -0.99
PNKP-228ENST00000637325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
PNKP-228ENST00000637325 ANAPC16Q96DE5 110 aa8.86□□□□□ -0.99
PNKP-228ENST00000637325 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
PNKP-228ENST00000637325 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
PNKP-228ENST00000637325 PPBPP02775 128 aa8.85□□□□□ -0.99
PNKP-228ENST00000637325 RPL32P62910 135 aaKnown RBP8.85□□□□□ -0.99
PNKP-228ENST00000637325 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
PNKP-228ENST00000637325 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
PNKP-228ENST00000637325 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
PNKP-228ENST00000637325 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
PNKP-228ENST00000637325 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 PHOX2AO14813 284 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 NPYP01303 97 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
PNKP-228ENST00000637325 CLLU1Q5K131 121 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 ORMDL3Q8N138 153 aa8.84□□□□□ -0.99
PNKP-228ENST00000637325 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
PNKP-228ENST00000637325 PANO1I0J062 215 aa8.83□□□□□ -1
PNKP-228ENST00000637325 MALP21145 153 aa8.83□□□□□ -1
PNKP-228ENST00000637325 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
PNKP-228ENST00000637325 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
PNKP-228ENST00000637325 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
PNKP-228ENST00000637325 J3QL48 77 aa8.82□□□□□ -1
PNKP-228ENST00000637325 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
PNKP-228ENST00000637325 CHTF8P0CG12 524 aa8.82□□□□□ -1
PNKP-228ENST00000637325 RAB5AP20339 215 aa8.82□□□□□ -1
PNKP-228ENST00000637325 COX6A2Q02221 97 aa8.82□□□□□ -1
PNKP-228ENST00000637325 PRELID3AQ96N28 172 aa8.82□□□□□ -1
PNKP-228ENST00000637325 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
PNKP-228ENST00000637325 COX7A2LO14548 114 aa8.81□□□□□ -1
PNKP-228ENST00000637325 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
PNKP-228ENST00000637325 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
PNKP-228ENST00000637325 Q6ZUT4 128 aa8.81□□□□□ -1
PNKP-228ENST00000637325 PRSS3P2Q8NHM4 247 aa8.8□□□□□ -1
PNKP-228ENST00000637325 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
PNKP-228ENST00000637325 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
PNKP-228ENST00000637325 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
PNKP-228ENST00000637325 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
PNKP-228ENST00000637325 A0A087WYN8 130 aa8.79□□□□□ -1
PNKP-228ENST00000637325 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
PNKP-228ENST00000637325 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
PNKP-228ENST00000637325 MAJINQ3KP22 176 aa8.79□□□□□ -1
PNKP-228ENST00000637325 UQCC3Q6UW78 93 aa8.79□□□□□ -1
PNKP-228ENST00000637325 CARD19Q96LW7 228 aa8.79□□□□□ -1
PNKP-228ENST00000637325 MAP1LC3AQ9H492 121 aa8.79□□□□□ -1
PNKP-228ENST00000637325 HERC1Q15751 4861 aa8.78□□□□□ -1
PNKP-228ENST00000637325 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
PNKP-228ENST00000637325 SYCNQ0VAF6 134 aa8.78□□□□□ -1
PNKP-228ENST00000637325 C5orf38Q86SI9 138 aa8.78□□□□□ -1
PNKP-228ENST00000637325 LAMTOR2Q9Y2Q5 125 aa8.78□□□□□ -1
PNKP-228ENST00000637325 APOMO95445 188 aa8.77□□□□□ -1.01
PNKP-228ENST00000637325 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
PNKP-228ENST00000637325 IFITM2Q01629 132 aa8.77□□□□□ -1.01
PNKP-228ENST00000637325 OPRPNQ99935 248 aaPredicted RBP8.77□□□□□ -1.01
PNKP-228ENST00000637325 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
PNKP-228ENST00000637325 TMEM218A2RU14 115 aa8.76□□□□□ -1.01
PNKP-228ENST00000637325 MRPS36P82909 103 aaKnown RBP8.76□□□□□ -1.01
PNKP-228ENST00000637325 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
PNKP-228ENST00000637325 CTDSP1Q9GZU7 261 aa8.76□□□□□ -1.01
PNKP-228ENST00000637325 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
PNKP-228ENST00000637325 IFITM10A6NMD0 228 aa8.75□□□□□ -1.01
PNKP-228ENST00000637325 PRSS47A8MTI9 375 aa8.75□□□□□ -1.01
PNKP-228ENST00000637325 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
PNKP-228ENST00000637325 STPG4Q8N801 248 aa8.75□□□□□ -1.01
PNKP-228ENST00000637325 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
PNKP-228ENST00000637325 CAMK2N2Q96S95 79 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 987.8 ms