RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ESDP10768 282 aa11.81□□□□□ -0.52
CLN6-210ENST00000635747 RHEBQ15382 184 aa11.81□□□□□ -0.52
CLN6-210ENST00000635747 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
CLN6-210ENST00000635747 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 VCYO14598 125 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 TSHBP01222 138 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 OR5A1Q8NGJ0 315 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 IMMP2LQ96T52 175 aa11.8□□□□□ -0.52
CLN6-210ENST00000635747 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
CLN6-210ENST00000635747 SNAPINO95295 136 aa11.79□□□□□ -0.52
CLN6-210ENST00000635747 APOC3P02656 99 aa11.79□□□□□ -0.52
CLN6-210ENST00000635747 RPS10P46783 165 aaKnown RBP11.79□□□□□ -0.52
CLN6-210ENST00000635747 SMAGPQ0VAQ4 97 aa11.79□□□□□ -0.52
CLN6-210ENST00000635747 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
CLN6-210ENST00000635747 C7orf77A4D0Y5 90 aa11.78□□□□□ -0.52
CLN6-210ENST00000635747 S100A8P05109 93 aa11.78□□□□□ -0.52
CLN6-210ENST00000635747 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
CLN6-210ENST00000635747 SDIM1Q6ZPB5 146 aa11.78□□□□□ -0.52
CLN6-210ENST00000635747 MRPL52Q86TS9 123 aaKnown RBP11.78□□□□□ -0.52
CLN6-210ENST00000635747 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
CLN6-210ENST00000635747 FCER1GP30273 86 aa11.77□□□□□ -0.53
CLN6-210ENST00000635747 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
CLN6-210ENST00000635747 KIR2DL4Q99706 377 aa11.77□□□□□ -0.53
CLN6-210ENST00000635747 HERC1Q15751 4861 aa11.75□□□□□ -0.53
CLN6-210ENST00000635747 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
CLN6-210ENST00000635747 CAMPP49913 170 aa11.75□□□□□ -0.53
CLN6-210ENST00000635747 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
CLN6-210ENST00000635747 NRACQ8N912 160 aa11.75□□□□□ -0.53
CLN6-210ENST00000635747 FLG2Q5D862 2391 aaPredicted RBP11.75□□□□□ -0.53
CLN6-210ENST00000635747 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
CLN6-210ENST00000635747 TRAV9-1A0A075B6T8 112 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 TCAPO15273 167 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 SS18Q15532 418 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 ATP5L2Q7Z4Y8 100 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 CDC42SE2Q9NRR3 84 aa11.74□□□□□ -0.53
CLN6-210ENST00000635747 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 SLPIP03973 132 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 CKS2P33552 79 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 HBBP68871 147 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 TMEM18Q96B42 140 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
CLN6-210ENST00000635747 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
CLN6-210ENST00000635747 CCL25O15444 150 aa11.72□□□□□ -0.53
CLN6-210ENST00000635747 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
CLN6-210ENST00000635747 FOXI1Q12951 378 aa11.72□□□□□ -0.53
CLN6-210ENST00000635747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
CLN6-210ENST00000635747 S100PP25815 95 aa11.71□□□□□ -0.53
CLN6-210ENST00000635747 XCL1P47992 114 aa11.71□□□□□ -0.53
CLN6-210ENST00000635747 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
CLN6-210ENST00000635747 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
CLN6-210ENST00000635747 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
CLN6-210ENST00000635747 GVQW2A0A096LPI5 108 aaPredicted RBP11.7□□□□□ -0.54
CLN6-210ENST00000635747 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
CLN6-210ENST00000635747 PPBPP02775 128 aa11.7□□□□□ -0.54
CLN6-210ENST00000635747 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
CLN6-210ENST00000635747 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
CLN6-210ENST00000635747 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
CLN6-210ENST00000635747 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
CLN6-210ENST00000635747 PHOX2AO14813 284 aa11.69□□□□□ -0.54
CLN6-210ENST00000635747 J3QL48 77 aa11.68□□□□□ -0.54
CLN6-210ENST00000635747 TNFRSF6BO95407 300 aa11.68□□□□□ -0.54
CLN6-210ENST00000635747 RPL37AP61513 92 aaKnown RBP11.68□□□□□ -0.54
CLN6-210ENST00000635747 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
CLN6-210ENST00000635747 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
CLN6-210ENST00000635747 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
CLN6-210ENST00000635747 PANO1I0J062 215 aa11.67□□□□□ -0.54
CLN6-210ENST00000635747 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
CLN6-210ENST00000635747 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
CLN6-210ENST00000635747 D6R8Y8 96 aa11.66□□□□□ -0.54
CLN6-210ENST00000635747 SMIM2Q9BVW6 85 aa11.66□□□□□ -0.54
CLN6-210ENST00000635747 SPACA4Q8TDM5 124 aa11.65□□□□□ -0.54
CLN6-210ENST00000635747 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
CLN6-210ENST00000635747 COX6A2Q02221 97 aa11.64□□□□□ -0.55
CLN6-210ENST00000635747 COX19Q49B96 90 aa11.64□□□□□ -0.55
CLN6-210ENST00000635747 ORMDL3Q8N138 153 aa11.64□□□□□ -0.55
CLN6-210ENST00000635747 A0A087WYN8 130 aa11.63□□□□□ -0.55
CLN6-210ENST00000635747 TMEM136Q6ZRR5 245 aa11.63□□□□□ -0.55
CLN6-210ENST00000635747 SMCO4Q9NRQ5 59 aa11.63□□□□□ -0.55
CLN6-210ENST00000635747 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
CLN6-210ENST00000635747 COX7A2LO14548 114 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 NPYP01303 97 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 CHTF8P0CG12 524 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 MALP21145 153 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 S100A1P23297 94 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 PLAC8Q9NZF1 115 aa11.62□□□□□ -0.55
CLN6-210ENST00000635747 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 OXTP01178 125 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 RAB5AP20339 215 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 LAMTOR2Q9Y2Q5 125 aa11.61□□□□□ -0.55
CLN6-210ENST00000635747 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
CLN6-210ENST00000635747 Q6ZUT4 128 aa11.6□□□□□ -0.55
CLN6-210ENST00000635747 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms