RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 ZNF705FA8MVS1 300 aaPredicted RBP3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 G3V3Q6 166 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 IFNA7P01567 189 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 GPX1P07203 203 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 OR10J4P0C629 311 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 ZNF705DP0CH99 300 aaPredicted RBP3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 ZNF705BP0CI00 300 aaPredicted RBP3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 SPART-AS1P0CW21 52 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 ARL14EPLP0DKL9 152 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 PYYP10082 97 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 GCHFRP30047 84 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 RPL19P84098 196 aaKnown RBP3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 AMTNQ6UX39 209 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 MBD3L1Q8WWY6 194 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 HIST1H2BAQ96A08 127 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 LINC00467Q9BRT7 94 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 SPANXA1Q9NS26 97 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 ICOSQ9Y6W8 199 aa3.1□□□□□ -1.91
SMARCA2-240ENST00000635392 HUWE1Q7Z6Z7 4374 aaKnown RBP3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 TRAV1-1A0A0B4J248 108 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 C7orf71A4D174 169 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 MAP1LC3B2A6NCE7 125 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 K7ERS5 55 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SLC17A3O00476 420 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 IFNA1P01562 189 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 LINC00614P0C842 121 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SPINK13Q1W4C9 94 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 GDF5OSQ5U4N7 250 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 C3orf22Q8N5N4 141 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SFT2D1Q8WV19 159 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 MAP1LC3BQ9GZQ8 125 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 AGPAT4-IT1Q9H0P7 198 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SLC35B3Q9H1N7 401 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 SH3BGRL3Q9H299 93 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 MANBALQ9NQG1 85 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 EPDR1Q9UM22 224 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 R4GN34 69 aa3.09□□□□□ -1.91
SMARCA2-240ENST00000635392 TRAV10A0A0B4J240 114 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 TRAV21A0A0B4J279 112 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 M0R2Z0 102 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 M0R3E3 92 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 TCRAP04437 139 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 HLA-DMBP28068 263 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 SULT1A2P50226 295 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 UBE2G1P62253 170 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 FLI1Q01543 452 aaPredicted RBP3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 GOLT1AQ6ZVE7 132 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 EIF4E3Q8N5X7 224 aaKnown RBP3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 TMEM75Q8N9X5 138 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 Q8NAQ8 132 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 FAM213BQ8TBF2 198 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 TMEM263Q8WUH6 116 aaKnown RBP3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 BIN3Q9NQY0 253 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 ZFP30Q9Y2G7 519 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 TIMM8BQ9Y5J9 83 aaPredicted RBP3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 DNAH7Q8WXX0 4024 aa3.08□□□□□ -1.92
SMARCA2-240ENST00000635392 IGKV2-40A0A087WW87 121 aaPredicted RBP3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 TRAV12-3A0A0B4J271 114 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 TRBV6-1A0A0K0K1D8 114 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 PDE6DO43924 150 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 IGKV2D-40P01614 121 aaPredicted RBP3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 HRES1P13985 223 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 RNASE4P34096 147 aaKnown RBP3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 MP68P56378 58 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 FXYD7P58549 80 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 DEFB1P60022 68 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 DAD1P61803 113 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 LGALS9BQ3B8N2 356 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 IBA57Q5T440 356 aaKnown RBP3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 Q6AWC8 147 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 TRAPPC1Q9Y5R8 145 aa3.07□□□□□ -1.92
SMARCA2-240ENST00000635392 TRAV12-2A0A075B6T6 113 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 FABP5P3A8MUU1 101 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 GGTLC3B5MD39 225 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 TSTD3H0UI37 97 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 PPBPP02775 128 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 ATP5G1P05496 136 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 HTN1P15515 57 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 AKR1C3P42330 323 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 ATP5G3P48201 142 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 EMP1P54849 157 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 TDRG1Q3Y452 100 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 NIT1Q86X76 327 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 ZFAND2AQ8N6M9 145 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 C15orf53Q8NAA6 179 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
SMARCA2-240ENST00000635392 DEFB131BA0A096LNP1 70 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 F5H768 121 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 TCL1AP56279 114 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 MEF2BQ02080 365 aaPredicted RBP3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 UBE2WQ96B02 151 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 SFRP2Q96HF1 295 aa3.05□□□□□ -1.92
SMARCA2-240ENST00000635392 SMDT1Q9H4I9 107 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms