RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 HMGB1P1B2RPK0 211 aaPredicted RBP1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 TMEM238C9JI98 176 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 K7EQM0 130 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 ARL6IP5O75915 188 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 PYYP10082 97 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 IAPPP10997 89 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 RCVRNP35243 200 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 DEFA1P59665 94 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 KRTAP10-12P60413 245 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 RANP62826 216 aaKnown RBP1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 WHAMMP3Q1A5X7 153 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 Q1RN00 199 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 LRRC37A5PQ49AS3 106 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SPANXN5Q5MJ07 72 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 C1orf195Q5TG92 126 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 OR5C1Q8NGR4 320 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SMCR5Q8TEV8 140 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 CCDC124Q96CT7 223 aaKnown RBP1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 HYLS1Q96M11 299 aa1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 CIB3Q96Q77 187 aaPredicted RBP1.18□□□□□ -2.22
SCARNA15.3-201ENST00000626315 TRAV18A0A075B6X5 111 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 B4DEV8 164 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 MED6O75586 246 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 UCHL1P09936 223 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 OR5AL1P0C617 328 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 RRAS2P62070 204 aaPredicted RBP1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 CTF1Q16619 201 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SMUG1Q53HV7 270 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 FAM74A1Q5RGS3 127 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SELENOHQ8IZQ5 122 aaKnown RBP1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 ZNF486Q96H40 463 aaPredicted RBP1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 Q96NJ1 140 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 STRAPQ9Y3F4 350 aaKnown RBP1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 OBSCNQ5VST9 7968 aa1.17□□□□□ -2.22
SCARNA15.3-201ENST00000626315 TRAV13-1A0A0B4J241 112 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 IGKV3D-20A0A0C4DH25 116 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 GRIFINA4D1Z8 144 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 M0R378 163 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 PDCD5O14737 125 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 APCSP02743 223 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 MAGOHP61326 146 aaKnown RBP1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SMCO1Q147U7 214 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 PP632Q6XCG6 107 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 SMIM29Q86T20 159 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 CROCCP2Q86T23 111 aa1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 ZNF471Q9BX82 626 aaPredicted RBP1.16□□□□□ -2.22
SCARNA15.3-201ENST00000626315 IFITM5A6NNB3 132 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 FABP5P3A8MUU1 101 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 H0YAA0 97 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 H7C2G1 150 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 MYL12BO14950 172 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 NCR2O95944 276 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 MGPP08493 103 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 PCP4P48539 62 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 TMBIM6P55061 237 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 FOXA3P55318 350 aaPredicted RBP1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 C2orf82Q6UX34 121 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 TMEM136Q6ZRR5 245 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 SPATA24Q86W54 205 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 AP3S1Q92572 193 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 TMEM18Q96B42 140 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 GABARAPL3Q9BY60 117 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CCDC59Q9P031 241 aaKnown RBP1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 RSL24D1Q9UHA3 163 aaKnown RBP1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 ORC6Q9Y5N6 252 aa1.15□□□□□ -2.23
SCARNA15.3-201ENST00000626315 EFCAB10A6NFE3 127 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 A8MWL6 223 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 M0QY20 66 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CAMLGP49069 296 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CKS1BP61024 79 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 MT1XP80297 61 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 DNAL1Q4LDG9 190 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 PAPPA-AS1Q5QFB9 102 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 DNLZQ5SXM8 178 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 LCE3CQ5T5A8 94 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 SPANXN1Q5VSR9 72 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 RASL11AQ6T310 242 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 IGFL1Q6UW32 110 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 NOTCH2NLQ7Z3S9 236 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 NIT2Q9NQR4 276 aa1.14□□□□□ -2.23
SCARNA15.3-201ENST00000626315 C9orf170A2RU37 121 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 H3BP45 60 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CTDSP2O14595 271 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 FKBP6O75344 327 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 SCO1O75880 301 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 PTMSP20962 102 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 SSTP61278 116 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 CD164Q04900 197 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 SAPCD1Q5SSQ6 148 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 Q5XG85 94 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 MIC13Q5XKP0 118 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 DEFB107AQ8IZN7 70 aa1.13□□□□□ -2.23
SCARNA15.3-201ENST00000626315 GPX8Q8TED1 209 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms