RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 OR10J1P30954 320 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 SNCAP37840 140 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 HSPE1P61604 102 aaKnown RBP0.6□□□□□ -2.31
VBP1-204ENST00000625964 HERVK_113P63121 156 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 SUPT4H1P63272 117 aaKnown RBP0.6□□□□□ -2.31
VBP1-204ENST00000625964 QRFPP83859 136 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 TMED1Q13445 227 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 MSMO1Q15800 293 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 MIAQ16674 131 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 ENHOQ6UWT2 76 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 SCGB1D4Q6XE38 83 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 COX6B2Q6YFQ2 88 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 FP248Q71RG6 208 aaPredicted RBP0.6□□□□□ -2.31
VBP1-204ENST00000625964 ATP5L2Q7Z4Y8 100 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 C10orf67Q8IYJ2 551 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 OR8I2Q8N0Y5 310 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 DAND5Q8N907 189 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 SMCR5Q8TEV8 140 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 ZNF431Q8TF32 576 aaPredicted RBP0.6□□□□□ -2.31
VBP1-204ENST00000625964 HOPXQ9BPY8 73 aaPredicted RBP0.6□□□□□ -2.31
VBP1-204ENST00000625964 TMEM109Q9BVC6 243 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 TMEM222Q9H0R3 208 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 CST9LQ9H4G1 147 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 LINC00474Q9P2X8 69 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 CKLFQ9UBR5 152 aa0.6□□□□□ -2.31
VBP1-204ENST00000625964 A0A087WWC5 75 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 A0A087WX48 190 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 A0A096LNI7 61 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 TRAV4A0A0B4J268 109 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 TRBV6-4A0A1B0GX49 114 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 SNRPGP15A8MWD9 76 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 M0R129 80 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 FAM107AO95990 144 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 MT2AP02795 61 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 SLC25A5P05141 298 aaKnown RBP0.59□□□□□ -2.31
VBP1-204ENST00000625964 SLC25A4P12235 298 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 CXCL3P19876 107 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 CASQ1P31415 396 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 POLR2GP62487 172 aaKnown RBP eCLIP0.59□□□□□ -2.31
VBP1-204ENST00000625964 CATR1Q13166 79 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 WHAMMP3Q1A5X7 153 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 CCDC58Q4VC31 144 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 RPL22L1Q6P5R6 122 aaKnown RBP0.59□□□□□ -2.31
VBP1-204ENST00000625964 KRTAP26-1Q6PEX3 210 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 Q6ZS49 121 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 ACBD7Q8N6N7 88 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 TSKUQ8WUA8 353 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 MAFIPQ8WZ33 124 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 ARHGAP5-AS1Q96IT6 56 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 ODF3Q96PU9 254 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 TSC22D3Q99576 134 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 PRADC1Q9BSG0 188 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 PBDC1Q9BVG4 233 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 GNB1LQ9BYB4 327 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 PARD6GQ9BYG4 376 aaPredicted RBP0.59□□□□□ -2.31
VBP1-204ENST00000625964 LPAR5Q9H1C0 372 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 MIXL1Q9H2W2 232 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 EFCAB1Q9HAE3 211 aa0.59□□□□□ -2.31
VBP1-204ENST00000625964 C7orf71A4D174 169 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 CRYM-AS1A6NIL9 109 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 GNGT2O14610 69 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 NPYP01303 97 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 MT1FP04733 61 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 FABP1P07148 127 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 LINC00694P0DN24 101 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 COX4I1P13073 169 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 RNASE4P34096 147 aaKnown RBP0.59□□□□□ -2.32
VBP1-204ENST00000625964 GTF2A1P52655 376 aaPredicted RBP0.59□□□□□ -2.32
VBP1-204ENST00000625964 ARPC4P59998 168 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 EIF5AP63241 154 aaKnown RBP0.59□□□□□ -2.32
VBP1-204ENST00000625964 RHOHQ15669 191 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 HSD17B12Q53GQ0 312 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 AADACL3Q5VUY0 350 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 HACD4Q5VWC8 232 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 C12orf73Q69YU5 71 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 KTN1-AS1Q86SY8 53 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 DNAJC9Q8WXX5 260 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 SMIM12Q96EX1 92 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 SAR1AQ9NR31 198 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 SLC39A9Q9NUM3 307 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 NKIRAS1Q9NYS0 192 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 PKIGQ9Y2B9 76 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 TMEM56-RWDD3S4R434 201 aa0.59□□□□□ -2.32
VBP1-204ENST00000625964 IGKV2D-26A0A0A0MRZ7 120 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 A0A0G2JND7 137 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 PNMA8CA0A1B0GUJ8 204 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 LINC00854A0A1B0GVQ3 168 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 MEIS3P1A6NDR6 274 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 TMEM262E9PQX1 116 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 M0R2P5 195 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 CFDP00746 253 aaPredicted RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 PPYP01298 95 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 NMBP08949 121 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 MGST1P10620 155 aaKnown RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 PVALBP20472 110 aaPredicted RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 SPRR2EP22531 72 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 S100A7P31151 101 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 SPRR2BP35325 72 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms