RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
USH1C-211ENST00000624811 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
USH1C-211ENST00000624811 SVBPQ8N300 66 aa8.69□□□□□ -1.02
USH1C-211ENST00000624811 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
USH1C-211ENST00000624811 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
USH1C-211ENST00000624811 I3L3M4 83 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 PHOX2AO14813 284 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 XCL1P47992 114 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 FOXI1Q12951 378 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 FAM231DQ6ZW35 169 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 RNF185Q96GF1 192 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 TMEM242Q9NWH2 141 aa8.68□□□□□ -1.02
USH1C-211ENST00000624811 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 H7C423 109 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 SNAPINO95295 136 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
USH1C-211ENST00000624811 LINC00526Q96FQ7 95 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 BTF3L4Q96K17 158 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
USH1C-211ENST00000624811 GVQW2A0A096LPI5 108 aaPredicted RBP8.66□□□□□ -1.02
USH1C-211ENST00000624811 CCL25O15444 150 aa8.66□□□□□ -1.02
USH1C-211ENST00000624811 TSHBP01222 138 aa8.66□□□□□ -1.02
USH1C-211ENST00000624811 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
USH1C-211ENST00000624811 Q6ZRU5 148 aa8.66□□□□□ -1.02
USH1C-211ENST00000624811 OR5A1Q8NGJ0 315 aa8.66□□□□□ -1.02
USH1C-211ENST00000624811 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
USH1C-211ENST00000624811 TRBV6-5A0A0K0K1A5 114 aa8.65□□□□□ -1.02
USH1C-211ENST00000624811 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
USH1C-211ENST00000624811 ADIRFQ15847 76 aa8.65□□□□□ -1.02
USH1C-211ENST00000624811 STPG4Q8N801 248 aa8.65□□□□□ -1.02
USH1C-211ENST00000624811 A0A096LNI7 61 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 HIGD1CA8MV81 97 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 SMKR1H3BMG3 65 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
USH1C-211ENST00000624811 CT83Q5H943 113 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
USH1C-211ENST00000624811 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
USH1C-211ENST00000624811 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 C7orf77A4D0Y5 90 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 ESDP10768 282 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 RHEBQ15382 184 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 TMEM191AQ9H0A3 160 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 RPS10P5Q9NQ39 176 aa8.63□□□□□ -1.03
USH1C-211ENST00000624811 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
USH1C-211ENST00000624811 SCO1O75880 301 aa8.62□□□□□ -1.03
USH1C-211ENST00000624811 RAB4AP20338 218 aa8.62□□□□□ -1.03
USH1C-211ENST00000624811 SS18Q15532 418 aa8.62□□□□□ -1.03
USH1C-211ENST00000624811 ISOC2Q96AB3 205 aa8.62□□□□□ -1.03
USH1C-211ENST00000624811 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
USH1C-211ENST00000624811 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
USH1C-211ENST00000624811 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
USH1C-211ENST00000624811 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
USH1C-211ENST00000624811 MT-ND4LP03901 98 aa8.6□□□□□ -1.03
USH1C-211ENST00000624811 FCER1GP30273 86 aa8.6□□□□□ -1.03
USH1C-211ENST00000624811 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
USH1C-211ENST00000624811 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
USH1C-211ENST00000624811 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
USH1C-211ENST00000624811 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
USH1C-211ENST00000624811 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
USH1C-211ENST00000624811 CD164L2Q6UWJ8 174 aa8.59□□□□□ -1.03
USH1C-211ENST00000624811 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
USH1C-211ENST00000624811 CTDSP1Q9GZU7 261 aa8.59□□□□□ -1.03
USH1C-211ENST00000624811 V9GYV3 84 aa8.59□□□□□ -1.03
USH1C-211ENST00000624811 VCYO14598 125 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 RIGQ13278 110 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 ODF1Q14990 250 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 ANAPC16Q96DE5 110 aa8.58□□□□□ -1.04
USH1C-211ENST00000624811 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 MALP21145 153 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 CAMPP49913 170 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 NRACQ8N912 160 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 SMCO4Q9NRQ5 59 aa8.57□□□□□ -1.04
USH1C-211ENST00000624811 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
USH1C-211ENST00000624811 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
USH1C-211ENST00000624811 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
USH1C-211ENST00000624811 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
USH1C-211ENST00000624811 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
USH1C-211ENST00000624811 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
USH1C-211ENST00000624811 COX7A2LO14548 114 aa8.55□□□□□ -1.04
USH1C-211ENST00000624811 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
USH1C-211ENST00000624811 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
USH1C-211ENST00000624811 TNXBP22105 4242 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 C1orf196B1AJZ1 125 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 Q6ZUT4 128 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 C5orf38Q86SI9 138 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 LINC01600Q96MT4 127 aa8.54□□□□□ -1.04
USH1C-211ENST00000624811 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms