RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 SS18Q15532 418 aa8.07□□□□□ -1.12
CBWD3-218ENST00000622755 Q5VSD8 79 aa8.07□□□□□ -1.12
CBWD3-218ENST00000622755 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
CBWD3-218ENST00000622755 GAGE12HA6NDE8 117 aa8.06□□□□□ -1.12
CBWD3-218ENST00000622755 ESDP10768 282 aa8.06□□□□□ -1.12
CBWD3-218ENST00000622755 PHOX2AO14813 284 aa8.05□□□□□ -1.12
CBWD3-218ENST00000622755 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-218ENST00000622755 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
CBWD3-218ENST00000622755 PRSS1P07477 247 aa8.05□□□□□ -1.12
CBWD3-218ENST00000622755 LCE2CQ5TA81 110 aa8.05□□□□□ -1.12
CBWD3-218ENST00000622755 MRPL52Q86TS9 123 aaKnown RBP8.05□□□□□ -1.12
CBWD3-218ENST00000622755 ORMDL3Q8N138 153 aa8.05□□□□□ -1.12
CBWD3-218ENST00000622755 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-218ENST00000622755 TRBV24-1A0A075B6N3 115 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 D6R8Y8 96 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 RAB5AP20339 215 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 Q6ZSA8 131 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 ZNF664Q8N3J9 261 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 NRACQ8N912 160 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
CBWD3-218ENST00000622755 A0A1B0GXF2 115 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 CCL25O15444 150 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
CBWD3-218ENST00000622755 HAMPP81172 84 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
CBWD3-218ENST00000622755 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 INAFM2P0DMQ5 153 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 XCL1P47992 114 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
CBWD3-218ENST00000622755 TMEM136Q6ZRR5 245 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 DPH3Q96FX2 82 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
CBWD3-218ENST00000622755 RYR1P21817 5038 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 LINC00959A0A1B0GUT2 108 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 MALP21145 153 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 S100PP25815 95 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 CTDSP1Q9GZU7 261 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 MAP1LC3AQ9H492 121 aa8.02□□□□□ -1.13
CBWD3-218ENST00000622755 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
CBWD3-218ENST00000622755 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
CBWD3-218ENST00000622755 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
CBWD3-218ENST00000622755 IGHV1-58A0A0C4DH39 117 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 TMEM218A2RU14 115 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 NPYP01303 97 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 CD164L2Q6UWJ8 174 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 KRTAP17-1Q9BYP8 105 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 SPANXA1Q9NS26 97 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
CBWD3-218ENST00000622755 HSPG2P98160 4391 aa7.99□□□□□ -1.13
CBWD3-218ENST00000622755 PRSS47A8MTI9 375 aa7.99□□□□□ -1.13
CBWD3-218ENST00000622755 IFI27P40305 119 aaPredicted RBP7.99□□□□□ -1.13
CBWD3-218ENST00000622755 HIGD2BQ4VC39 106 aa7.99□□□□□ -1.13
CBWD3-218ENST00000622755 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
CBWD3-218ENST00000622755 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 APOMO95445 188 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 G0S2P27469 103 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 FOXI1Q12951 378 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 COMMD7Q86VX2 200 aa7.98□□□□□ -1.13
CBWD3-218ENST00000622755 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
CBWD3-218ENST00000622755 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
CBWD3-218ENST00000622755 COX7A2LO14548 114 aa7.97□□□□□ -1.13
CBWD3-218ENST00000622755 C15orf56Q8N910 161 aa7.97□□□□□ -1.13
CBWD3-218ENST00000622755 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
CBWD3-218ENST00000622755 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.13
CBWD3-218ENST00000622755 K7EMI3 77 aa7.96□□□□□ -1.13
CBWD3-218ENST00000622755 IFITM2Q01629 132 aa7.96□□□□□ -1.13
CBWD3-218ENST00000622755 APOBP04114 4563 aaKnown RBP7.96□□□□□ -1.13
CBWD3-218ENST00000622755 COX19Q49B96 90 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 RNASE13Q5GAN3 156 aaKnown RBP7.95□□□□□ -1.14
CBWD3-218ENST00000622755 Q6ZN92 141 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 Q6ZUT4 128 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 NXT2Q9NPJ8 142 aaKnown RBP7.95□□□□□ -1.14
CBWD3-218ENST00000622755 IFITM10A6NMD0 228 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 RPL39P62891 51 aaKnown RBP7.95□□□□□ -1.14
CBWD3-218ENST00000622755 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
CBWD3-218ENST00000622755 NDUFA5Q16718 116 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 C2orf88Q9BSF0 95 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 LINC00474Q9P2X8 69 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 CYSLTR1Q9Y271 337 aa7.95□□□□□ -1.14
CBWD3-218ENST00000622755 PCLOQ9Y6V0 5065 aa7.94□□□□□ -1.14
CBWD3-218ENST00000622755 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms