RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 ST20Q9HBF5 79 aa7.4□□□□□ -1.22
LINC00649-218ENST00000620580 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.23
LINC00649-218ENST00000620580 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 I3L3M4 83 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 VCYO14598 125 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
LINC00649-218ENST00000620580 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
LINC00649-218ENST00000620580 RBX1P62877 108 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 COTL1Q14019 142 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 CIRBP-AS1Q8TBR5 109 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
LINC00649-218ENST00000620580 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
LINC00649-218ENST00000620580 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 D6R8Y8 96 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 USP17L23D6RBM5 183 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 TNFRSF6BO95407 300 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 S100A1P23297 94 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
LINC00649-218ENST00000620580 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 J3QL48 77 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 APCSP02743 223 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 PRSS1P07477 247 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
LINC00649-218ENST00000620580 PRELID3AQ96N28 172 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 KIR2DL4Q99706 377 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 PRR34Q9NV39 138 aa7.37□□□□□ -1.23
LINC00649-218ENST00000620580 IGLV10-54A0A075B6I4 117 aa7.36□□□□□ -1.23
LINC00649-218ENST00000620580 ESDP10768 282 aa7.36□□□□□ -1.23
LINC00649-218ENST00000620580 MIAQ16674 131 aa7.36□□□□□ -1.23
LINC00649-218ENST00000620580 C14orf177Q52M58 125 aa7.36□□□□□ -1.23
LINC00649-218ENST00000620580 TMEM243Q9BU79 118 aa7.36□□□□□ -1.23
LINC00649-218ENST00000620580 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 TSHBP01222 138 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 NPYP01303 97 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-218ENST00000620580 PMCHP20382 165 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 SMAGPQ0VAQ4 97 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 MAP1LC3AQ9H492 121 aa7.35□□□□□ -1.23
LINC00649-218ENST00000620580 NXT2Q9NPJ8 142 aaKnown RBP7.35□□□□□ -1.23
LINC00649-218ENST00000620580 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
LINC00649-218ENST00000620580 IGLV4-60A0A075B6I1 120 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 LINC01546A6NGU7 62 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 PANO1I0J062 215 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 AMTP48728 403 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 MRPL52Q86TS9 123 aaKnown RBP7.34□□□□□ -1.23
LINC00649-218ENST00000620580 CBLN2Q8IUK8 224 aa7.34□□□□□ -1.23
LINC00649-218ENST00000620580 MRPL18Q9H0U6 180 aaKnown RBP7.34□□□□□ -1.23
LINC00649-218ENST00000620580 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
LINC00649-218ENST00000620580 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
LINC00649-218ENST00000620580 G0S2P27469 103 aa7.33□□□□□ -1.24
LINC00649-218ENST00000620580 REG3AQ06141 175 aa7.33□□□□□ -1.24
LINC00649-218ENST00000620580 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
LINC00649-218ENST00000620580 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
LINC00649-218ENST00000620580 TRAPPC1Q9Y5R8 145 aa7.33□□□□□ -1.24
LINC00649-218ENST00000620580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
LINC00649-218ENST00000620580 NPSP0C0P6 89 aa7.32□□□□□ -1.24
LINC00649-218ENST00000620580 Q8N8P6 123 aa7.32□□□□□ -1.24
LINC00649-218ENST00000620580 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
LINC00649-218ENST00000620580 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
LINC00649-218ENST00000620580 COLCA2A8K830 154 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 SLPIP03973 132 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 FCER1GP30273 86 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 FABP9Q0Z7S8 132 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 HMCN2Q8NDA2 5059 aa7.31□□□□□ -1.24
LINC00649-218ENST00000620580 UBE2L6O14933 153 aa7.3□□□□□ -1.24
LINC00649-218ENST00000620580 ATP6V1G1O75348 118 aa7.3□□□□□ -1.24
LINC00649-218ENST00000620580 RAB5AP20339 215 aa7.3□□□□□ -1.24
LINC00649-218ENST00000620580 HNRNPA3P51991 378 aaKnown RBP7.3□□□□□ -1.24
LINC00649-218ENST00000620580 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
LINC00649-218ENST00000620580 SDIM1Q6ZPB5 146 aa7.3□□□□□ -1.24
LINC00649-218ENST00000620580 hDV102S1A0JD36 115 aa7.29□□□□□ -1.24
LINC00649-218ENST00000620580 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
LINC00649-218ENST00000620580 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
LINC00649-218ENST00000620580 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 IGKV3OR2-268A0A0C4DH90 116 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 CCL25O15444 150 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 FGF6P10767 208 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 RPL37AP61513 92 aaKnown RBP7.28□□□□□ -1.24
LINC00649-218ENST00000620580 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
LINC00649-218ENST00000620580 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
LINC00649-218ENST00000620580 IFI27P40305 119 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-218ENST00000620580 RAB5BP61020 215 aa7.27□□□□□ -1.25
LINC00649-218ENST00000620580 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-218ENST00000620580 IGKV2-29A2NJV5 120 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-218ENST00000620580 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 CNBPP62633 177 aaKnown RBP7.26□□□□□ -1.25
LINC00649-218ENST00000620580 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 OR5A1Q8NGJ0 315 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 PRSS3P2Q8NHM4 247 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
LINC00649-218ENST00000620580 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms