RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 TRBV7-7A0A0K0K1E9 115 aa10.77□□□□□ -0.68
PTPN9-206ENST00000618819 M0R378 163 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 WDR90Q96KV7 1748 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 DEFB131BA0A096LNP1 70 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 THSD7AQ9UPZ6 1657 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 U3KQK5 164 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 TICRRQ7Z2Z1 1910 aa10.77□□□□□ -0.69
PTPN9-206ENST00000618819 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
PTPN9-206ENST00000618819 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
PTPN9-206ENST00000618819 CRIP2P52943 208 aaPredicted RBP10.76□□□□□ -0.69
PTPN9-206ENST00000618819 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
PTPN9-206ENST00000618819 UBE2D2P62837 147 aa10.75□□□□□ -0.69
PTPN9-206ENST00000618819 ZNF73O43830 326 aaPredicted RBP10.75□□□□□ -0.69
PTPN9-206ENST00000618819 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
PTPN9-206ENST00000618819 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
PTPN9-206ENST00000618819 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 TSHBP01222 138 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 Q6ZSV7 163 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
PTPN9-206ENST00000618819 PYGO1Q9Y3Y4 419 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 A6NDX4 124 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 IGHV6-1A0A0B4J1U7 121 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 PLAC8L1A1L4L8 177 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 ZNF843Q8N446 348 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 BBC3Q96PG8 261 aaPredicted RBP10.73□□□□□ -0.69
PTPN9-206ENST00000618819 VWA8A3KMH1 1905 aa10.73□□□□□ -0.69
PTPN9-206ENST00000618819 ZNF706Q9Y5V0 76 aaPredicted RBP10.72□□□□□ -0.69
PTPN9-206ENST00000618819 LINC00482Q8N8I6 264 aa10.72□□□□□ -0.69
PTPN9-206ENST00000618819 M0R2N4 97 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 C10orf25Q5T742 122 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 ODF3Q96PU9 254 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 Q9UF83 564 aa10.71□□□□□ -0.69
PTPN9-206ENST00000618819 YPEL4Q96NS1 127 aa10.71□□□□□ -0.7
PTPN9-206ENST00000618819 ACACAQ13085 2346 aa10.71□□□□□ -0.7
PTPN9-206ENST00000618819 Q8N3U1 123 aa10.71□□□□□ -0.7
PTPN9-206ENST00000618819 A0A087WYN8 130 aa10.71□□□□□ -0.7
PTPN9-206ENST00000618819 NRACQ8N912 160 aa10.71□□□□□ -0.7
PTPN9-206ENST00000618819 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
PTPN9-206ENST00000618819 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
PTPN9-206ENST00000618819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.7□□□□□ -0.7
PTPN9-206ENST00000618819 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
PTPN9-206ENST00000618819 PRM2P04554 102 aa10.69□□□□□ -0.7
PTPN9-206ENST00000618819 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
PTPN9-206ENST00000618819 KIAA1549Q9HCM3 1950 aa10.69□□□□□ -0.7
PTPN9-206ENST00000618819 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
PTPN9-206ENST00000618819 K7EQG2 157 aa10.69□□□□□ -0.7
PTPN9-206ENST00000618819 H0Y9P7 68 aa10.68□□□□□ -0.7
PTPN9-206ENST00000618819 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
PTPN9-206ENST00000618819 Q6ZSR3 168 aa10.68□□□□□ -0.7
PTPN9-206ENST00000618819 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
PTPN9-206ENST00000618819 IGF2-ASQ6U949 168 aa10.68□□□□□ -0.7
PTPN9-206ENST00000618819 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 CIRBP-AS1Q8TBR5 109 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 PLXNA2O75051 1894 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 P0C879 139 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 VPREB1P12018 145 aa10.67□□□□□ -0.7
PTPN9-206ENST00000618819 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 HILS1P60008 231 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
PTPN9-206ENST00000618819 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 Q8N814 137 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 TRBV6-4A0A1B0GX49 114 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 C1orf229Q6ZS94 237 aaPredicted RBP10.66□□□□□ -0.7
PTPN9-206ENST00000618819 NCOA6Q14686 2063 aaPredicted RBP10.66□□□□□ -0.7
PTPN9-206ENST00000618819 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
PTPN9-206ENST00000618819 PRO0628Q9UI54 55 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 CREBBPQ92793 2442 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 ATRXP46100 2492 aa10.66□□□□□ -0.7
PTPN9-206ENST00000618819 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 KIAA1671Q9BY89 1806 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 MED12LQ86YW9 2145 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 FRMPD3Q5JV73 1810 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 MED13LQ71F56 2210 aa10.65□□□□□ -0.7
PTPN9-206ENST00000618819 ADORA2A-AS1P86434 159 aa10.64□□□□□ -0.71
PTPN9-206ENST00000618819 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
PTPN9-206ENST00000618819 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
PTPN9-206ENST00000618819 SHISA2Q6UWI4 295 aa10.64□□□□□ -0.71
PTPN9-206ENST00000618819 PCDH15Q96QU1 1955 aa10.64□□□□□ -0.71
PTPN9-206ENST00000618819 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
PTPN9-206ENST00000618819 SIP14410 1827 aa10.63□□□□□ -0.71
PTPN9-206ENST00000618819 LINC00575Q6W349 94 aa10.63□□□□□ -0.71
PTPN9-206ENST00000618819 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
PTPN9-206ENST00000618819 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
PTPN9-206ENST00000618819 PRR9Q5T870 116 aa10.63□□□□□ -0.71
PTPN9-206ENST00000618819 COX17Q14061 63 aa10.63□□□□□ -0.71
PTPN9-206ENST00000618819 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
PTPN9-206ENST00000618819 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
PTPN9-206ENST00000618819 CYSRT1A8MQ03 144 aa10.61□□□□□ -0.71
PTPN9-206ENST00000618819 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
PTPN9-206ENST00000618819 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
PTPN9-206ENST00000618819 IL17DQ8TAD2 202 aa10.61□□□□□ -0.71
PTPN9-206ENST00000618819 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms